Evidence map›Paper›PMID 39621428›Full record

ArticleThe Journal of cell biology2025

KPNA3 regulates histone locus body formation by modulating condensation and nuclear import of NPAT.

Shui Bo Xu, Xiu Kui Gao, Hao Di Liang, Xiao Xia Cong, Xu Qi Chen, Wen Kai Zou, Jia Li Tao, Zhao Yuan Pan, Jiao Zhao, Man Huang and 3 more

Abstract read
In one paragraph

Article in The Journal of cell biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. KAS-CUT&Tag for direct mapping of transcription bubbles.bioRxiv : the preprint server for biology · 2026
    Article
  3. Review
  4. A negative feedback mechanism controls histone gene expression.Nature structural & molecular biology · 2026
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Shui Bo Xu *Department of General Intensive Care Unit and Department of Biochemistry of the Second Affiliated Hospital, Liangzhu Laboratory, Zhejiang University School of Medicine, Hangzhou, China.ORCID 0009-0008-7230-0527
Xiu Kui Gao *International Institutes of Medicine, the Fourth Affiliated Hospital of Zhejiang University School of Medicine , Yiwu, China.ORCID 0000-0002-6602-0974
Hao Di LiangDepartment of General Intensive Care Unit and Department of Biochemistry of the Second Affiliated Hospital, Liangzhu Laboratory, Zhejiang University School of Medicine, Hangzhou, China.ORCID 0009-0003-2386-7555
Xiao Xia CongDepartment of General Intensive Care Unit and Department of Biochemistry of the Second Affiliated Hospital, Liangzhu Laboratory, Zhejiang University School of Medicine, Hangzhou, China.ORCID 0000-0001-6125-3181
Xu Qi ChenDepartment of General Intensive Care Unit and Department of Biochemistry of the Second Affiliated Hospital, Liangzhu Laboratory, Zhejiang University School of Medicine, Hangzhou, China.ORCID 0009-0001-4908-6680
Wen Kai ZouDepartment of General Intensive Care Unit and Department of Biochemistry of the Second Affiliated Hospital, Liangzhu Laboratory, Zhejiang University School of Medicine, Hangzhou, China.
Jia Li TaoDepartment of General Intensive Care Unit and Department of Biochemistry of the Second Affiliated Hospital, Liangzhu Laboratory, Zhejiang University School of Medicine, Hangzhou, China.ORCID 0009-0005-8778-2408
Zhao Yuan PanDepartment of General Intensive Care Unit and Department of Biochemistry of the Second Affiliated Hospital, Liangzhu Laboratory, Zhejiang University School of Medicine, Hangzhou, China.ORCID 0009-0001-1177-2255
Jiao ZhaoDepartment of Endocrinology, Hangzhou First People's Hospital, Hangzhou, China.ORCID 0009-0000-2339-7643
Man HuangDepartment of General Intensive Care Unit and Department of Biochemistry of the Second Affiliated Hospital, Liangzhu Laboratory, Zhejiang University School of Medicine, Hangzhou, China.ORCID 0000-0002-0842-2254
Zhang BaoDepartment of Respiratory Medicine, the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.ORCID 0000-0002-3057-1109
Yi Ting ZhouZJU-UoE Institute, Dr. Li Dak Sum & Yip Yio Chin Center for Stem Cell and Regenerative Medicine, Zhejiang University School of Medicine , Hangzhou, China.ORCID 0000-0003-4543-3099
Li Ling ZhengDepartment of General Intensive Care Unit and Department of Biochemistry of the Second Affiliated Hospital, Liangzhu Laboratory, Zhejiang University School of Medicine, Hangzhou, China.ORCID 0000-0002-0378-2816

Funding

China Postdoctoral Science Foundation 2021M702848National Key R&D Program of China 2021YFA1100500National Natural Science Foundation of China 32070821Science and Technology Commission of Zhejiang Province 2022R52040
6 · The paper itself

Abstract

The histone locus body (HLB) is a membraneless organelle that determines the transcription of replication-dependent histones. However, the mechanisms underlying the appropriate formation of the HLB in the nucleus but not in the cytoplasm remain unknown. HLB formation is dependent on the scaffold protein NPAT. We identify KPNA3 as a specific importin that drives the nuclear import of NPAT by binding to the nuclear localization signal (NLS) sequence. NPAT undergoes phase separation, which is inhibited by KPNA3-mediated impairment of self-association. In this, a C-terminal self-interaction facilitator (C-SIF) motif, proximal to the NLS, binds the middle 431-1,030 sequence to mediate the self-association of NPAT. Mechanistically, the anchoring of KPNA3 to the NPAT-NLS sterically blocks C-SIF motif-dependent NPAT self-association. This leads to the suppression of aberrant NPAT condensation in the cytoplasm. Collectively, our study reveals a previously unappreciated role of KPNA3 in modulating HLB formation and delineates a steric hindrance mechanism that prevents inappropriate cytoplasmic NPAT condensation.

Indexed as

Active Transport, Cell Nucleusalpha KaryopherinsCell NucleusHistonesNuclear Localization SignalsCytoplasmHEK293 CellsHeLa CellsHumansNuclear ProteinsProtein Bindingalpha KaryopherinsHistonesKPNA3 protein, humanNuclear Localization SignalsNuclear Proteins

Identifiers

PMID39621428
PMCPMC11613458

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.