Evidence map›Paper›PMID 39639742›Full record

ArticleNanoscale2025

Cleavable energy transfer labeled oligonucleotide probe for enhanced isothermal amplification detection and nano digital chip-based readout.

Li Liu, Stephen J Dollery, Gregory J Tobin, Guoyu Lu, Ke Du

Abstract read
In one paragraph

Article in Nanoscale, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Li LiuDepartment of Chemical and Environmental Engineering, University of California, Riverside, CA, USA. kdu@ucr.edu.
Stephen J DolleryBiological Mimetics, Inc., 124 Byte Drive, Frederick, MD, USA.
Gregory J TobinBiological Mimetics, Inc., 124 Byte Drive, Frederick, MD, USA.
Guoyu LuIntelligent Vision and Sensing Lab, University of Georgia, Athens, GA, USA.
Ke DuDepartment of Chemical and Environmental Engineering, University of California, Riverside, CA, USA. kdu@ucr.edu.ORCID http://orcid.org/0009-0005-5194-281X

Funding

Understand and Detect Sepsis: Pathogen Isolation, Biochemistry Assay, and Optofluidic SensingR35GM142763 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI DU, KE · 2021 to 2025
$2.0M
NIGMS NIH HHS R35 GM142763
6 · The paper itself

Abstract

Quantitative analysis of human papillomavirus (HPV)-infected cervical cancer is essential for early diagnosis and timely treatment of cervical cancer. Here, we introduce a novel energy transfer-labeled oligonucleotide probe to enhance the loop-mediated isothermal amplification (LAMP) assay for highly sensitive and specific detection of HPV 16. Conducted as a single-step assay within a digital nanofluidic chip featuring numerous reaction reservoirs, our method facilitates target amplification under isothermal conditions. Targeting an HPV 16 gene, our chip demonstrates the capability to detect HPV DNA at concentrations as low as 1 fM, spanning a dynamic range of five orders of magnitude. Importantly, our nano digital chip enables for highly quantitative detection at low concentrations, with the correlation between target concentration and the number of microwells exhibiting fluorescence signals. Furthermore, we have developed a computer vision method for automated and 100% accurate quantification of target concentrations. This research holds promising applications in clinical diagnosis and is poised for seamless integration into both hospital and point-of-care settings.

Indexed as

DNA, ViralHuman papillomavirus 16Nucleic Acid Amplification TechniquesOligonucleotide ProbesEnergy TransferFemaleHumansMolecular Diagnostic TechniquesUterine Cervical NeoplasmsDNA, ViralOligonucleotide Probes

Identifiers

PMID39639742
PMCPMC11750181

What Socratic holds

Textmetadata
LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.