Evidence map›Paper›PMID 39645625›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2024

Transcriptome-guided breeding for Paspalum notatum: producing apomictic hybrids with enhanced omega-3 content.

Lara Marino, Silvia Altabe, Carolina Marta Colono, Maricel Podio, Juan Pablo Amelio Ortiz, David Balaban, Juliana Stein, Nicolás Spoto, Carlos Acuña, Lorena Adelina Siena and 3 more

Abstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Lara MarinoInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Parque Villarino S/N, Z2125ZAA Zavalla, Rosario, Santa Fe, Argentina.
Silvia AltabeInstituto de Biología Molecular y Celular de Rosario (IBR-CONICET-UNR), 27 de Febrero 27 Bis, 2000, Rosario, Argentina.
Carolina Marta ColonoInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Parque Villarino S/N, Z2125ZAA Zavalla, Rosario, Santa Fe, Argentina.ORCID http://orcid.org/0000-0001-7771-2127
Maricel PodioInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Parque Villarino S/N, Z2125ZAA Zavalla, Rosario, Santa Fe, Argentina.ORCID http://orcid.org/0000-0001-9797-1089
Juan Pablo Amelio OrtizInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Parque Villarino S/N, Z2125ZAA Zavalla, Rosario, Santa Fe, Argentina.ORCID http://orcid.org/0000-0001-8460-6154
David BalabanInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Parque Villarino S/N, Z2125ZAA Zavalla, Rosario, Santa Fe, Argentina.
Juliana SteinInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Parque Villarino S/N, Z2125ZAA Zavalla, Rosario, Santa Fe, Argentina.
Nicolás SpotoInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Parque Villarino S/N, Z2125ZAA Zavalla, Rosario, Santa Fe, Argentina.
Carlos AcuñaInstituto de Botánica del Nordeste (IBONE-CONICET-UNNE), Sargento Cabral 2134, 3400, Corrientes, Argentina.ORCID http://orcid.org/0000-0002-8878-086X
Lorena Adelina SienaInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Parque Villarino S/N, Z2125ZAA Zavalla, Rosario, Santa Fe, Argentina.ORCID http://orcid.org/0000-0003-3738-9075
José GerdeInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Parque Villarino S/N, Z2125ZAA Zavalla, Rosario, Santa Fe, Argentina.ORCID http://orcid.org/0000-0002-6579-3318
Emidio AlbertiniDipartimento Di Scienze Agrarie, Alimentari E Ambientali, Università Degli Studi Di Perugia, 06121, Perugia, Italy.ORCID http://orcid.org/0000-0003-2585-5649
Silvina Claudia PessinoInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Parque Villarino S/N, Z2125ZAA Zavalla, Rosario, Santa Fe, Argentina. pessino@iicar-conicet.gob.ar.ORCID http://orcid.org/0000-0002-0200-8706

Funding

Agencia Nacional de Promoción de la Investigación, el Desarrollo Tecnológico y la Innovación PICT-2017-1956Agencia Nacional de Promoción de la Investigación, el Desarrollo Tecnológico y la Innovación PICT 2019-02153Agencia Nacional de Promoción de la Investigación, el Desarrollo Tecnológico y la Innovación PICT 2019-03414Consejo Nacional de Investigaciones Científicas y Técnicas 11220200101680COConsejo Nacional de Investigaciones Científicas y Técnicas 22920160100043COH2020 Marie Skłodowska-Curie Actions 101007438 (POLYPLOID)H2020 Marie Skłodowska-Curie Actions 872417 (MAD)Universidad Nacional de Rosario 80020190300021UR
6 · The paper itself

Abstract

key messageTranscriptomics- and FAME-GC-MS-assisted apomixis breeding generated Paspalum notatum hybrids with clonal reproduction and increased α-linolenic acid content, offering the potential to enhance livestock product's nutritional quality and reduce methane emissions A low omega-6:omega-3 fatty acid ratio is considered an indicator of the nutritional impact of milk fat on human health. In ruminants, major long-chain fatty acids, such as linoleic acid (18:2, omega-6) and α-linolenic acid (18:3, omega-3), originate from dietary sources and reach the milk via the bloodstream. Since forages are the primary source of long-chain fatty acids for such animals, they are potential targets for improving milk lipid composition. Moreover, a high 18:3 content in their diet is associated with reduced methane emissions during grazing. This work aimed to develop genotypes of the forage grass Paspalum notatum with high leaf 18:3 content and the ability for clonal reproduction via seeds (apomixis). We assembled diploid and polyploid Paspalum notatum leaf transcriptomes and recovered sequences of two metabolism genes associated with the establishment of lipid profiles, namely SUGAR-DEPENDENT 1 (SDP1) and PEROXISOMAL ABC TRANSPORTER 1 (PXA1). Primers were designed to amplify all expressed paralogs in leaves. qPCR was used to analyse SDP1 and PXA1 expression in seven divergent genotypes. Reduced levels of SDP1 and PXA1 were found in the polyploid sexual genotype Q4188. Fatty acid methyl esters/gas chromatography/mass spectrometry (FAME/GC/MS) assays confirmed an increased percentage of 18:3 in this genotype. Crosses between Q4188 and the obligate apomictic pollen donor Q4117 resulted in two apomictic F

Indexed as

Fatty Acids, Omega-3PaspalumPlant BreedingTranscriptomeAnimalsGenotypeHybridization, GeneticPlant LeavesFatty Acids, Omega-3

Identifiers

PMID39645625
PMCPMC11625688

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.