Evidence map›Paper›PMID 39663849›Full record

ArticleGenetics2025

Robust sex determination in the Caenorhabditis nigoni germ line.

Jonathan P Harbin, Yongquan Shen, Shin-Yi Lin, Kevin Kemper, Eric S Haag, Erich M Schwarz, Ronald E Ellis

Abstract read
In one paragraph

Article in Genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. TheiScience · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jonathan P HarbinDepartment of Molecular Biology, Rowan-Virtua School of Translational Biomedical Engineering and Sciences, Stratford, NJ 08084, USA.
Yongquan ShenDepartment of Molecular Biology, Rowan-Virtua School of Translational Biomedical Engineering and Sciences, Stratford, NJ 08084, USA.
Shin-Yi LinDepartment of Molecular Biology, Rowan-Virtua School of Osteopathic Medicine, Stratford, NJ 08084, USA.
Kevin KemperDepartment of Molecular Biology, Rowan-Virtua School of Translational Biomedical Engineering and Sciences, Stratford, NJ 08084, USA.
Eric S HaagDepartment of Biology, University of Maryland, College Park, MD 20742, USA.
Erich M SchwarzDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0003-3151-4381
Ronald E EllisDepartment of Molecular Biology, Rowan-Virtua School of Translational Biomedical Engineering and Sciences, Stratford, NJ 08084, USA.

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Regulation of the Gli protein TRA-1 by co-factorsR01GM118836 · NIGMS · ROWAN UNIVERSITY SCHOOL/OSTEOPATHIC MED · PI ELLIS, RONALD E · 2017 to 2020
$1.2M
Dissecting the origins of a complex reproductive trait: nematode self fertilityR01GM121688 · NIGMS · ROWAN UNIVERSITY SCHOOL/OSTEOPATHIC MED · PI ELLIS, RONALD E · 2017 to 2020
$1.2M
American Cancer Society 126627-PF-15-228-01-DDCNIGMS NIH HHS R01 GM118836NIGMS NIH HHS R01 GM121688NIH HHS P40 OD010440NIH HHS R01GM118836
6 · The paper itself

Abstract

Sexual characteristics and reproductive systems are dynamic traits in many taxa, but the developmental modifications that allow change and innovation are largely unknown. A leading model for this process is the evolution of self-fertile hermaphrodites from male/female ancestors. However, these studies require direct analysis of sex determination in male/female species, as well as in the hermaphroditic species that are related to them. In Caenorhabditis nematodes, this has only become possible recently, with the discovery of new species. Here, we use gene editing to characterize major sex determination genes in Caenorhabditis nigoni, a sister to the widely studied hermaphroditic species Caenorhabditis briggsae. These 2 species are close enough to mate and form partially fertile hybrids. First, we find that tra-1 functions as the master regulator of sex in C. nigoni, in both the soma and the germ line. Surprisingly, these mutants make only sperm, in contrast to tra-1 mutants in related hermaphroditic species. Moreover, the XX mutants display a unique defect in somatic gonad development that is not seen elsewhere in the genus. Second, the fem-3 gene acts upstream of tra-1 in C. nigoni, and the mutants are females, unlike in the sister species C. briggsae, where they develop as hermaphrodites. This result points to a divergence in the role of fem-3 in the germ line of these species. Third, tra-2 encodes a transmembrane receptor that acts upstream of fem-3 in C. nigoni. Outside of the germ line, tra-2 mutations in all species cause a similar pattern of partial masculinization. However, heterozygosity for tra-2 does not alter germ cell fates in C. nigoni, as it can in sensitized backgrounds of 2 hermaphroditic species of Caenorhabditis. Finally, the epistatic relationships point to a simple, linear germline pathway in which tra-2 regulates fem-3 which regulates tra-1, unlike the more complex relationships seen in hermaphrodite germ cell development. Taking these results together, the regulation of sex determination is more robust and streamlined in the male/female species C. nigoni than in related species that make self-fertile hermaphrodites, a conclusion supported by studies of interspecies hybrids using sex determination mutations. Thus, we infer that the origin of self-fertility not only required mutations that activated the spermatogenesis program in XX germ lines, but prior to these there must have been mutations that decanalized the sex determination process, allowing for subsequent changes to germ cell fates.

Indexed as

CaenorhabditisGerm CellsSex Determination ProcessesAnimalsFemaleHermaphroditic OrganismsMaleCaenorhabditisevolutionnematodesex determination

Identifiers

PMID39663849
PMCPMC12005254

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.