Evidence map›Paper›PMID 39666007›Full record

ArticleThe Journal of experimental medicine2025

Baseline colitogenicity and acute perturbations of gut microbiota in immunotherapy-related colitis.

Joan Shang, Diane Marie Del Valle, Graham J Britton, K R Mead, Urvija Rajpal, Alice Chen-Liaw, Ilaria Mogno, Zhihua Li, Rajita Menon, Edgar Gonzalez-Kozlova and 9 more

Abstract read
In one paragraph

Article in The Journal of experimental medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Lysophosphatidylcholine sensitizes TRPV2 by indirect mechanisms.Pflugers Archiv : European journal of physiology · 2025
    Article
  12. The gut microbiota in cancer immunity and immunotherapy.Cellular & molecular immunology · 2025
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Joan ShangPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0000-0001-8274-1109
Diane Marie Del ValleHuman Immune Monitoring Center, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0000-0001-6983-5362
Graham J BrittonPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0000-0003-4630-1223
K R MeadPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0000-0001-7285-2163
Urvija RajpalPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0009-0004-9147-1453
Alice Chen-LiawPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0000-0002-3600-4674
Ilaria MognoPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0000-0002-8180-6609
Zhihua LiPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0009-0002-9991-5034
Rajita MenonVedanta Biosciences , Cambridge, MA, USA.ORCID 0000-0002-4767-0971
Edgar Gonzalez-KozlovaPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0000-0002-6948-0626
Arielle ElkriefDepartment of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0003-1981-1535
Jonathan U PeledDepartment of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-4029-7625
Tina Ruth GonsalvesHuman Immune Monitoring Center, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0000-0002-5882-9693
Neil J ShahDepartment of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0001-5752-6212
Michael PostowDepartment of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-3367-7961
Jean-Frederic ColombelDivision of Gastroenterology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0001-6472-249X
Sacha GnjaticPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0000-0001-5643-9520
David M FaleckDepartment of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-8245-9653
Jeremiah J FaithPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0000-0002-2691-4500

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
THE TISCH CANCER INSTITUTE - CANCER CENTER SUPPORT GRANTP30CA196521 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Ramon E Parsons · 2015 to 2026
$35.4M
High-Dimensional Immune Monitoring of NCI-Supported Immunotherapy TrialsU24CA224319 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Sacha Gnjatic, Seunghee Kim-Schulze · 2017 to 2026
$21.5M
The Influence Of Gut Microbiota Stability In Inflammatory Bowel DiseaseR01DK112978 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Jeremiah James Faith · 2019 to 2026
$5.3M
Characterizing and predicting colitis in immune checkpoint blockade-treated cancer patientsU01DK124165 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI COLOMBEL, JEAN-FREDERIC, FAITH, JEREMIAH JAMES · 2020 to 2024
$2.9M
Microbiota mechanisms and biomarkers in GVHDK08HL143189 · NHLBI · SLOAN-KETTERING INST CAN RESEARCH · PI PELED, JONATHAN · 2019 to 2023
$858k
Dissecting the Gut Microbiota for Immune Checkpoint Blockade (ICB) - Resisting Microbes and Exploring the Generalizability of Microbiota-ICB StudiesF30CA261144 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI SHANG, JOAN · 2021 to 2024
$194k
Memorial Sloan-Kettering Cancer CenterNCI NIH HHS F30 CA261144NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA196521NCI NIH HHS U24 CA224319NHLBI NIH HHS K08 HL143189NIDDK NIH HHS R01 DK112978NIDDK NIH HHS U01 DK124165NIH HHS K08HL143189
6 · The paper itself

Abstract

Immunotherapy-related colitis (irC) frequently emerges as an immune-related adverse event during immune checkpoint inhibitor therapy and is presumably influenced by the gut microbiota. We longitudinally studied microbiomes from 38 ICI-treated cancer patients. We compared 13 ICI-treated subjects who developed irC against 25 ICI-treated subjects who remained irC-free, along with a validation cohort. Leveraging a preclinical mouse model, predisease stools from irC subjects induced greater colitigenicity upon transfer to mice. The microbiota during the first 10 days of irC closely resembled inflammatory bowel disease microbiomes, with reduced diversity, increased Proteobacteria and Veillonella, and decreased Faecalibacterium, which normalized before irC remission. These findings highlight the irC gut microbiota as functionally distinct but phylogenetically similar to non-irC and healthy microbiomes, with the exception of an acute, transient disruption early in irC. We underscore the significance of longitudinal microbiome profiling in developing clinical avenues to detect, monitor, and mitigate irC in ICI therapy cancer patients.

Indexed as

ColitisGastrointestinal MicrobiomeImmunotherapyAgedAnimalsFecesFemaleHumansImmune Checkpoint InhibitorsMaleMiceMice, Inbred C57BLMiddle AgedNeoplasmsImmune Checkpoint Inhibitors

Identifiers

PMID39666007
PMCPMC11636624

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.