Evidence map›Paper›PMID 39670995›Full record

ArticleThe Journal of experimental medicine2025

Altered X-chromosome inactivation of the TLR7/8 locus and heterogeneity of pDCs in systemic sclerosis.

Yong Du, Bérénice Faz-Lopez, Marie Dominique Ah Kioon, Claire Cenac, Michael Pierides, Kimberly S Lakin, Robert F Spiera, Julie Chaumeil, Marie-Elise Truchetet, Jessica K Gordon and 2 more

Abstract read
In one paragraph

Article in The Journal of experimental medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Sex-dependent mechanisms in rheumatic diseases.Nature reviews. Rheumatology · 2026
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  16. Unraveled role of TLR7-mediated interferon signaling activation in COVID-19.Frontiers in cellular and infection microbiology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yong Du *HSS Research Institute and David Z. Rosensweig Genomics Research Center, Inflammation and Autoimmunity Program, Hospital for Special Surgery , New York, NY, USA.ORCID 0000-0003-2986-6249
Bérénice Faz-Lopez *Institut Toulousain des Maladies Infectieuses et Inflammatoires, Université de Toulouse, INSERM, CNRS, UPS , Toulouse, France.ORCID 0000-0002-1160-8543
Marie Dominique Ah KioonHSS Research Institute and David Z. Rosensweig Genomics Research Center, Inflammation and Autoimmunity Program, Hospital for Special Surgery , New York, NY, USA.ORCID 0000-0003-2319-0444
Claire CenacInstitut Toulousain des Maladies Infectieuses et Inflammatoires, Université de Toulouse, INSERM, CNRS, UPS , Toulouse, France.ORCID 0000-0001-6641-7851
Michael PieridesHSS Research Institute and David Z. Rosensweig Genomics Research Center, Inflammation and Autoimmunity Program, Hospital for Special Surgery , New York, NY, USA.ORCID 0000-0002-7882-6967
Kimberly S LakinDivision of Rheumatology and Scleroderma and Vasculitis Center, Department of Medicine, Hospital for Special Surgery, New York, NY, USA.ORCID 0000-0001-9343-5545
Robert F SpieraDivision of Rheumatology and Scleroderma and Vasculitis Center, Department of Medicine, Hospital for Special Surgery, New York, NY, USA.ORCID 0000-0003-2911-6800
Julie ChaumeilInstitut Cochin, Université Paris Cité, CNRS, INSERM , Paris, France.ORCID 0000-0002-8976-2890
Marie-Elise TruchetetImmunoConcEpt, CNRS, UMR 5164, University of Bordeaux , Talence, France.ORCID 0000-0001-8045-0180
Jessica K GordonDivision of Rheumatology and Scleroderma and Vasculitis Center, Department of Medicine, Hospital for Special Surgery, New York, NY, USA.ORCID 0000-0001-8068-0592
Jean-Charles Guéry *Institut Toulousain des Maladies Infectieuses et Inflammatoires, Université de Toulouse, INSERM, CNRS, UPS , Toulouse, France.ORCID 0000-0003-4499-3270
Franck J Barrat *HSS Research Institute and David Z. Rosensweig Genomics Research Center, Inflammation and Autoimmunity Program, Hospital for Special Surgery , New York, NY, USA.ORCID 0000-0002-0735-0850

Funding

Role of plasmacytoid dendritic cells in autoimmunityR01AI132447 · NIAID · HOSPITAL FOR SPECIAL SURGERY · PI BARRAT, FRANCK · 2018 to 2022
$2.2M
Agence Nationale de la Recherche ANR-20-CE15-0014-01FOREUM Foundation for Research in RheumatologyNIAID NIH HHS R01 AI132447NIH HHS 1R01AI132447Région Occitanie Pyrénées-Méditerranée #1901175Scleroderma FoundationScleroderma Research FoundationTow Foundation
6 · The paper itself

Abstract

Systemic sclerosis (SSc) is an autoimmune disease that has a strong female predominance. Both the X-linked TLR7 and TLR8 can induce type I IFN (IFN-I) by plasmacytoid DCs (pDCs), which can promote fibrosis. We identified five subclusters of pDCs, including ISGhigh clusters that were over-represented in SSc patients. We observed that both TLR7 and TLR8 genes escape from X chromosome inactivation (XCI) at higher frequency in pDCs of SSc patients, which was associated with changes in TLR7 protein profile. Combined DNA/RNA FISH analysis revealed that the TLR7/8 locus is preferentially located outside of the inactive X (Xi) territory when TLR7 is expressed, suggesting that higher-order loop formation is linked to TLR7/8 expression from the Xi. Furthermore, the expression levels of XIST and the transcriptional repressor SPEN were reduced in SSc pDCs. Hence, our data revealed the heterogeneity of pDCs in SSc and suggested that altered XCI at the TLR7/8 locus may contribute to the chronic IFN-I activity of pDCs in female SSc patients.

Indexed as

Dendritic CellsScleroderma, SystemicToll-Like Receptor 7Toll-Like Receptor 8X Chromosome InactivationAdultAgedFemaleGenetic LociHumansInterferon Type IMaleMiddle AgedRNA, Long NoncodingInterferon Type IRNA, Long NoncodingTLR7 protein, humanTLR8 protein, humanToll-Like Receptor 7Toll-Like Receptor 8XIST non-coding RNA

Identifiers

PMID39670995
PMCPMC11639950

What Socratic holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.