Evidence map›Paper›PMID 39671436›Full record

ArticlePLoS genetics2024

Integrin adhesome axis inhibits the RPM-1 ubiquitin ligase signaling hub to regulate growth cone and axon development.

Jonathan Amezquita, Muriel Desbois, Karla J Opperman, Joseph S Pak, Elyse L Christensen, Nikki T Nguyen, Karen Diaz-Garcia, Melissa A Borgen, Brock Grill

Abstract read
In one paragraph

Article in PLoS genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Jonathan AmezquitaCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington, United States of America.
Muriel DesboisSchool of Life Sciences, Keele University, Keele, Staffordshire, United Kingdom.ORCID 0000-0002-8070-2525
Karla J OppermanCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington, United States of America.ORCID 0000-0001-9545-8361
Joseph S PakCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington, United States of America.
Elyse L ChristensenMolecular and Cellular Biology Graduate Program, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0003-2117-1602
Nikki T NguyenCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington, United States of America.ORCID 0009-0005-5159-2530
Karen Diaz-GarciaCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington, United States of America.
Melissa A BorgenFlorida Institute of Technology, Department of Biomedical Engineering and Sciences, Melbourne, United States of America.ORCID 0000-0003-2600-9946
Brock GrillCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington, United States of America.ORCID 0000-0002-0379-3267

Funding

Mechanisms of synapse formation and axon termination in C. elegansR01NS072129 · NINDS · UNIVERSITY OF MINNESOTA · PI GRILL, BROCK · 2011 to 2024
$8.0M
Molecular genetic mechanisms of opioid receptor signalingR01DA048036 · NIDA · SEATTLE CHILDREN'S HOSPITAL · PI Brock Grill, Kirill A. Martemyanov · 2019 to 2026
$5.8M
NIDA NIH HHS R01 DA048036NINDS NIH HHS R01 NS072129
6 · The paper itself

Abstract

Integrin signaling plays important roles in development and disease. An adhesion signaling network called the integrin adhesome has been principally defined using bioinformatics and cell-based proteomics. To date, the adhesome has not been studied using integrated proteomic and genetic approaches. Here, proteomic studies in C. elegans identified physical associations between the RPM-1 ubiquitin ligase signaling hub and numerous adhesome components including Talin (TLN-1), Kindlin (UNC-112) and β-integrin (PAT-3). C. elegans RPM-1 is orthologous to human MYCBP2, a prominent player in nervous system development recently associated with a neurodevelopmental disorder. After curating and updating the conserved C. elegans adhesome, we identified an adhesome subnetwork physically associated with RPM-1 that has extensive links to human neurobehavioral abnormalities. Using neuron-specific, CRISPR loss-of-function strategies, we demonstrate that a PAT-3/UNC-112/TLN-1 adhesome axis regulates axon termination in mechanosensory neurons by inhibiting RPM-1. Developmental time-course studies and pharmacological results suggest TLN-1 inhibition of RPM-1 affects growth cone collapse and microtubule dynamics during axon outgrowth. These results indicate the PAT-3/UNC-112/TLN-1 adhesome axis restricts RPM-1 signaling to ensure axon outgrowth is terminated in a spatially and temporally accurate manner. Thus, our findings orthogonally validate the adhesome using an organismal setting, identify an adhesome axis that inhibits RPM-1 (MYCBP2), and highlight important new links between the adhesome and brain disorders.

Indexed as

AxonsCaenorhabditis elegansCaenorhabditis elegans ProteinsGrowth ConesSignal TransductionUbiquitin-Protein LigasesAnimalsGuanine Nucleotide Exchange FactorsHumansIntegrinsNeurogenesisProteomicsTalinCaenorhabditis elegans ProteinsGuanine Nucleotide Exchange FactorsIntegrinsRPM-1 protein, C elegansTalinUbiquitin-Protein Ligases

Identifiers

PMID39671436
PMCPMC11642917

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.