Evidence map›Paper›PMID 39695567›Full record

ArticleBMC biology2024

Functional omics of ORP7 in primary endothelial cells.

Juuso H Taskinen, Minna Holopainen, Hanna Ruhanen, Miesje van der Stoel, Reijo Käkelä, Elina Ikonen, Salla Keskitalo, Markku Varjosalo, Vesa M Olkkonen

Abstract read
In one paragraph

Article in BMC biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Juuso H TaskinenMinerva Foundation Institute for Medical Research, Tukholmankatu 8, 00290, Helsinki, Finland.
Minna HolopainenMolecular and Integrative Biosciences Research Programme, Faculty of Biological and Environmental Sciences, Helsinki University Lipidomics Unit (HiLIPID), Helsinki Institute of Life Science (HiLIFE) and Biocenter Finland, University of Helsinki, Viikinkaari 1, PO BOX 65, 00014, Helsinki, Finland.
Hanna RuhanenMolecular and Integrative Biosciences Research Programme, Faculty of Biological and Environmental Sciences, Helsinki University Lipidomics Unit (HiLIPID), Helsinki Institute of Life Science (HiLIFE) and Biocenter Finland, University of Helsinki, Viikinkaari 1, PO BOX 65, 00014, Helsinki, Finland.
Miesje van der StoelMinerva Foundation Institute for Medical Research, Tukholmankatu 8, 00290, Helsinki, Finland.
Reijo KäkeläMolecular and Integrative Biosciences Research Programme, Faculty of Biological and Environmental Sciences, Helsinki University Lipidomics Unit (HiLIPID), Helsinki Institute of Life Science (HiLIFE) and Biocenter Finland, University of Helsinki, Viikinkaari 1, PO BOX 65, 00014, Helsinki, Finland.
Elina IkonenMinerva Foundation Institute for Medical Research, Tukholmankatu 8, 00290, Helsinki, Finland.
Salla KeskitaloProteomics Unit Viikki, Institute of Biotechnology, HiLIFE and Biocenter Finland, University of Helsinki, Viikinkaari 1, 00790, Helsinki, Finland.
Markku VarjosaloProteomics Unit Viikki, Institute of Biotechnology, HiLIFE and Biocenter Finland, University of Helsinki, Viikinkaari 1, 00790, Helsinki, Finland.
Vesa M OlkkonenMinerva Foundation Institute for Medical Research, Tukholmankatu 8, 00290, Helsinki, Finland. vesa.olkkonen@helsinki.fi.ORCID 0000-0001-5553-7997

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMany members of the oxysterol-binding protein-related protein (ORP) family have been characterized in detail over the past decades, but the lipid transport and other functions of ORP7 still remain elusive. What is known about ORP7 points toward an endoplasmic reticulum and plasma membrane-localized protein, which also interacts with GABA type A receptor-associated protein like 2 (GABARAPL2) and unlipidated Microtubule-associated proteins 1A/1B light chain 3B (LC3B), suggesting a further autophagosomal/lysosomal association. Functional roles of ORP7 have been suggested in cholesterol efflux, hypercholesterolemia, and macroautophagy. We performed a hypothesis-free multi-omics analysis of chemical ORP7 inhibition utilizing transcriptomics and lipidomics as well as proximity biotinylation interactomics to characterize ORP7 functions in a primary cell type, human umbilical vein endothelial cells (HUVECs). Moreover, assays on angiogenesis, cholesterol efflux, and lipid droplet quantification were conducted.

resultsPharmacological inhibition of ORP7 leads to an increase in gene expression related to lipid metabolism and inflammation, while genes associated with cell cycle and cell division were downregulated. Lipidomic analysis revealed increases in ceramides and lysophosphatidylcholines as well as saturated and monounsaturated triacylglycerols. Significant decreases were seen in all cholesteryl ester and in some unsaturated triacylglycerol species, compatible with the detected decrease of mean lipid droplet area. Along with the reduced lipid stores, ATP-binding cassette subfamily G member 1 (ABCG1)-mediated cholesterol efflux and angiogenesis decreased. Interactomics revealed an interaction of ORP7 with AKT1, a central metabolic regulator.

conclusionsThe transcriptomics results suggest an increase in prostanoid as well as oxysterol synthesis, which could be related to the observed upregulation of proinflammatory genes. We envision that the defective angiogenesis in HUVECs subjected to ORP7 inhibition could be the result of an unfavorable plasma membrane lipid composition and/or reduced potential for cell division. To conclude, the present study suggests multifaceted functions of ORP7 in lipid homeostasis, angiogenic tube formation, and gene expression of lipid metabolism, inflammation, and cell cycle in primary endothelial cells.

Indexed as

Human Umbilical Vein Endothelial CellsReceptors, SteroidHumansLipid MetabolismLipidomicsOxysterol Binding ProteinsTranscriptomeOxysterol Binding ProteinsReceptors, SteroidAKT1Endothelial cellsInflammationInteractomicsLipidomicsORP7OSBPL7Transcriptomics

Identifiers

PMID39695567
PMCPMC11656939

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.