Evidence mapPaperPMID 39697700Full record

ArticleTranslational cancer research2024

Construction of a disulfidptosis-related lncRNAs signature of the subtype, prognostic, and immunotherapy in neuroblastoma.

Yongcheng Fu, Nan Zhang, Jingyue Wang, Yuanyuan Wang, Da Zhang

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Article in Translational cancer research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

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3 · Its place in the literature

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1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Yongcheng FuDepartment of Pediatric Surgery, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Nan ZhangDepartment of Emergency, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Jingyue WangDepartment of Pediatric Surgery, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Yuanyuan WangDepartment of Pediatric Surgery, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Da ZhangDepartment of Pediatric Surgery, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Disulfidptosis is an emerging form of regulated cell death distinguished by abnormal disulfide stress and the collapse of the actin network. This study was to construct a prognostic model based on disulfidptosis-related lncRNAs (DRLs) to enhance survival prediction and assess their viability as biomarkers for immunotherapy response in neuroblastoma (NB). Methods: Transcriptomic and clinical data from NB patients were obtained from the Therapeutically Applicable Research to Generate Effective Treatments (TARGET) and Gene Expression Omnibus (GEO) databases. DRLs linked to overall survival (OS) were identified using Pearson correlation and univariate Cox regression analyses. Molecular subtypes of NB were determined through consensus clustering. Immune cell infiltration was assessed with multiple algorithms. A prognostic model was constructed using least absolute shrinkage and selection operator (LASSO) regression. Tumor mutational burden (TMB) analysis on somatic mutations from the TARGET database explored the TMB and risk score relationship. Patient responses to immunotherapy and anti-tumor drugs were predicted using tumor immune dysfunction and exclusion (TIDE), Tumor Inflammation Signature (TIS), Genomics of Drug Sensitivity in Cancer (GDSC) database, and CellMiner tools. Results: We identified 151 DRLs associated with OS and defined three distinct DRLs subtypes. Using eight of these, we created a prognostic model. This model was proven independently significant and divided NB patients into high and low-risk groups. The high-risk group showed poorer OS, reduced immune cell presence and infiltration, and weaker response to immunotherapy. Conversely, the low-risk group demonstrated potential immunotherapy effectiveness and increased sensitivity to anti-tumor drugs. Conclusions: We established a prognostic model based on DRLs to predict the prognosis of NB patients, assess the immune cell infiltration, analyze TMB, evaluate the effectiveness of immunotherapy, and gauge sensitivity to anti-tumor drug treatments.

Indexed as

disulfidptosisimmunotherapylong noncoding RNA (lncRNA)Neuroblastoma (NB)prognostic

Identifiers

PMID39697700
PMCPMC11651765

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.