Evidence map›Paper›PMID 39698852›Full record

ArticlePlant biotechnology journal2025

Characterization of a tomato chlh mis-sense mutant reveals a new function of ChlH in fruit ripening.

Dawei Xu, Li Lin, Xiaorui Liu, MeLongying Wangzha, Xiaoqing Pang, Liping Feng, Bingbing Wan, Guo-Zhang Wu, Jingquan Yu, Jean-David Rochaix and 2 more

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Transcriptomics Analysis Reveals an Early Response GeneCurrent issues in molecular biology · 2025
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Dawei Xu *School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Li Lin *School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Xiaorui LiuSchool of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
MeLongying WangzhaSchool of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Xiaoqing PangInstitute of Biology/Plant Physiology, Humboldt-Universität zu Berlin, Berlin, Germany.
Liping FengSchool of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Bingbing WanKey Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai, China.
Guo-Zhang WuSchool of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Jingquan YuDepartment of Horticulture, Zhejiang University, Hangzhou, China.ORCID https://orcid.org/0000-0002-7626-1165
Jean-David RochaixDepartment of Molecular Biology, University of Geneva, Geneva, Switzerland.
Bernhard GrimmInstitute of Biology/Plant Physiology, Humboldt-Universität zu Berlin, Berlin, Germany.
Ruohe YinSchool of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.ORCID https://orcid.org/0000-0001-6782-4651

Funding

Hainan Seed Industry Laboratory and China National Seed Group (project of B24YQ0003)National Natural Science Foundation of China 32070261National Natural Science Foundation of China 32102459National Natural Science Foundation of China 32170246Natural Science Foundation of Shanghai Municipality 22ZR1431300
6 · The paper itself

Abstract

Tomato fruit ripening is a complex developmental process that is important for fruit quality and shelf life. Many factors, including ethylene and several key transcription factors, have been shown to play important roles in the regulation of tomato fruit ripening. However, our understanding of the regulation of tomato fruit ripening is still limited. Here, we describe mut26, an EMS-induced tomato (Solanum lycopersicum) mutant that exhibits chlorophyll-deficient phenotypes in various organs, including fruits. Genetic mapping and functional analyses revealed that a single-nucleotide substitution and a corresponding Pro398->Ser mis-sense mutation in SlChlH (GENOMES UNCOUPLED 5, GUN5), which encodes the H subunit of magnesium chelatase, are responsible for the defects in the mut26 strain. Transcript analyses towards the expression of many SlPhANGs revealed that mut26 is defective in plastid retrograde signalling during tomato fruit ripening initiation, namely the transition from mature green to breaker stage. mut26 exhibits delayed progression of fruit ripening characterized by reduced fruit ethylene emission, increased fruit firmness, reduced carotenoid content and delayed plastid conversion from chloroplast to chromoplast. Given that fruit ripening requires signalling from plastids to nucleus, these data support the hypothesis that GUN5-mediated plastid retrograde signalling promotes tomato fruit ripening. We further showed that the delayed fruit ripening of mut26 is not likely caused by reduced chlorophyll content. Taken together, we identified a new function of SlChlH in the promotion of tomato fruit ripening and ethylene biosynthesis, suggesting that GUN5-mediated plastid retrograde signalling plays a promotive role in tomato fruit ripening.

Indexed as

FruitLyasesPlant ProteinsSolanum lycopersicumChlorophyllEthylenesGene Expression Regulation, PlantMutationChlorophyllethyleneEthylenesLyasesmagnesium chelatasePlant Proteinschloroplastfruit ripeninggunretrograde signallingtomato

Identifiers

PMID39698852
PMCPMC11869169

What Socratic holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.