Evidence map›Paper›PMID 39701973›Full record

ArticleBMC plant biology2024

The genetic architecture of resistance to septoria tritici blotch in French wheat cultivars.

Jean-Noël Thauvin, Sandrine Gélisse, Florence Cambon, Thierry Langin, Breedwheat consortium, Thierry C Marcel, Cyrille Saintenac

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jean-Noël ThauvinUniversité Clermont Auvergne, INRAE, UMR GDEC, Clermont-Ferrand, France.
Sandrine GélisseUniversité Paris Saclay, INRAE, UR BIOGER, Palaiseau, France.
Florence CambonUniversité Clermont Auvergne, INRAE, UMR GDEC, Clermont-Ferrand, France.
Thierry LanginUniversité Clermont Auvergne, INRAE, UMR GDEC, Clermont-Ferrand, France.
Breedwheat consortium
Thierry C MarcelUniversité Paris Saclay, INRAE, UR BIOGER, Palaiseau, France.
Cyrille SaintenacUniversité Clermont Auvergne, INRAE, UMR GDEC, Clermont-Ferrand, France. cyrille.saintenac@inrae.fr.

Funding

FranceAgriMer 2013-0544French fund to support breeding research FSOV-2018-DivRFrench Research National Agency, PIA BREEDWHEAT ANR-10-BTBR-03
6 · The paper itself

Abstract

backgroundSeptoria tritici blotch (STB) is one of the most damaging wheat diseases worldwide, and the development of resistant cultivars is of paramount importance for sustainable crop management. However, the genetic basis of the resistance present in elite wheat cultivars remains largely unknown, which limits the implementation of this strategy. A collection of 285 wheat cultivars originating mostly from France was challenged with ten Zymoseptoria tritici isolates at the seedling stage. The collection was further evaluated in seven field trials across France using artificial inoculation.

resultsGenome-wide association study resulted in the detection of 57 wheat QTL, among which 40 were detected at the seedling stage. Three quarters of these QTL were in genomic regions previously reported for to confer resistance to Z. tritici, but 10 QTL are novel and may be of special interest as new sources of resistance. Some QTL colocalise with major Stb resistance genes, suggesting their presence in the French elite winter wheat germplasm. Among them, the three QTL with the strongest effect colocalize with Stb6, Stb9 and Stb18. There was minimal overlap between the QTL detected at the seedling and adult plant stages, with only 1 out of 20 seedling QTL also being detected in field trials inoculated with the same isolate. This suggests that different resistance genes are involved at the seedling and adult plant stages.

conclusionThis work reveals the highly complex genetic architecture of French wheat resistance to STB and provides relatively small QTL intervals, which will be valuable for identifying the underlying causative genes and for marker-assisted selection.

Indexed as

AscomycotaDisease ResistanceGenome-Wide Association StudyPlant DiseasesQuantitative Trait LociTriticumFranceSeedlingsGWASMarkersQTLResistanceSeptoria tritici blotchStb

Identifiers

PMID39701973
PMCPMC11657422

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.