Evidence map›Paper›PMID 39705363›Full record

ArticleScience advances2024

A combined NMR and deep neural network approach for enhancing the spectral resolution of aromatic side chains in proteins.

Vaibhav Kumar Shukla, Gogulan Karunanithy, Pramodh Vallurupalli, D Flemming Hansen

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. The perspective of artificial intelligence for NMR.Magnetic resonance letters · 2027
    Review
  2. Article
  3. Article
  4. Deep Learning Assisted Proton Pure Shift NMR Spectroscopy.Journal of the American Chemical Society · 2026
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Vaibhav Kumar ShuklaDepartment of Structural and Molecular Biology, Division of Biosciences, University College London, London WC1E 6BT, UK.ORCID 0000-0001-5342-258X
Gogulan KarunanithyDepartment of Structural and Molecular Biology, Division of Biosciences, University College London, London WC1E 6BT, UK.ORCID 0000-0002-8072-5911
Pramodh VallurupalliTata Institute of Fundamental Research Hyderabad, 36/P, Gopanpally Village, Serilingampally Mandal, Ranga Reddy District, Hyderabad 500046, India.ORCID 0000-0002-0936-6098
D Flemming HansenDepartment of Structural and Molecular Biology, Division of Biosciences, University College London, London WC1E 6BT, UK.ORCID 0000-0003-0891-220X

Funding

TRD3 NMRbox: Bayesian AnalyticsP41GM111135 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HOCH, JEFFREY C · 2015 to 2024
$14.0M
Medical Research CouncilNIGMS NIH HHS P41 GM111135Wellcome Trust FC001029
6 · The paper itself

Abstract

Nuclear magnetic resonance (NMR) spectroscopy is an important technique for deriving the dynamics and interactions of macromolecules; however, characterizations of aromatic residues in proteins still pose a challenge. Here, we present a deep neural network (DNN), which transforms NMR spectra recorded on simple uniformly

Indexed as

Neural Networks, ComputerProteinsMagnetic Resonance SpectroscopyNuclear Magnetic Resonance, BiomolecularProteins

Identifiers

PMID39705363
PMCPMC11801238

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.