Evidence mapPaperPMID 39707607Full record

ArticleInternational journal of cancer2025

Genetic variants of FER and SULF1 in the fibroblast-related genes are associated with non-small-cell lung cancer survival.

Guojun Lu, Hongliang Liu, Huilin Wang, Sheng Luo, Mulong Du, David C Christiani, Qingyi Wei

Abstract read
In one paragraph

Article in International journal of cancer, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Guojun LuDepartment of Respiratory Medicine, Nanjing Chest Hospital, Affiliated Nanjing Brain Hospital, Nanjing Medical University, Nanjing, Jiangsu, China.ORCID 0000-0001-8753-4926
Hongliang LiuDuke Cancer Institute, Duke University Medical Center, Durham, North Carolina, USA.
Huilin WangDuke Cancer Institute, Duke University Medical Center, Durham, North Carolina, USA.
Sheng LuoDepartment of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, North Carolina, USA.ORCID 0000-0003-4214-5809
Mulong DuDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
David C ChristianiDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Qingyi WeiDuke Cancer Institute, Duke University Medical Center, Durham, North Carolina, USA.ORCID 0000-0002-3845-9445

Funding

Women's Cancer ProgramP30CA014236 · NCI · DUKE UNIVERSITY · 1985 to 2025
$66.3M
GENETIC SUSCEPTIBILITY TO LUNG CANCERR01CA074386 · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · 1997 to 2005
$3.4M
Molecular Epidemiology of Head and Neck CancerR01ES011740 · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · 2001 to 2005
$3.3M
SPORE in Lung CancerP20CA090578 · DANA-FARBER CANCER INSTITUTE · 2003 to 2005
$3.1M
Molecular and Genetic Analysis of Lung Cancer SurvivalR01CA092824 · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · 2002 to 2005
$2.3M
The Boston Lung Cancer Survival CohortU01CA209414 · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · 2025 to 2025
$1.2M
Statistical Methods for Analysis of Massive Genetic and Genomic Data in Cancer ResearchR35CA197449 · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · 2025 to 2025
$926k
Jiangsu Health International Exchange ProgramNCI NIH HHS P20 CA090578NCI NIH HHS P30 CA014236NCI NIH HHS P50 CA090578NCI NIH HHS R01 CA074386NCI NIH HHS R01 CA092824NCI NIH HHS R01 CA131274NCI NIH HHS R35 CA197449NCI NIH HHS U01 CA209414NIEHS NIH HHS R01 ES011740NIH grants 1R01CA 131274NIH grants 2R01 ES011740NIH grants CA074386NIH grants CA090578NIH grants CA092824NIH grants U01CA209414P30 Cancer Center Support Grant NIH/NCI CA014236
6 · The paper itself

Abstract

Fibroblasts are important components in the tumor microenvironment and can affect tumor progression and metastasis. However, the roles of genetic variants of the fibroblast-related genes (FRGs) in the prognosis of non-small-cell lung cancer (NSCLC) patients have not been reported. Therefore, we investigated the associations between 26,544 single nucleotide polymorphisms (SNPs) in 291 FRGs and survival of NSCLC patients from the Prostate, Lung, Colorectal, and Ovarian (PLCO) Cancer Screening Trial. In Cox regression multivariable analysis, we found that 661 SNPs were associated with NSCLC overall survival (OS). Then we validated these SNPs in another independent replication dataset of 984 patients from the Harvard Lung Cancer Susceptibility (HLCS) Study. Finally, we identified two independent SNPs (i.e., FER rs7716388 A>G and SULF1 rs11785839 G>C) that remained significantly associated with NSCLC survival with hazards ratios (HRs) of 0.87 (95% confidence interval [CI] = 0.77-0.98, p = 0.018) and 0.88 (95% CI = 0.79-0.99, p = 0.033), respectively. Combined analysis for these two SNPs showed that the number of protective alleles was associated with better OS and disease-specific survival. Expression quantitative trait loci analysis indicated that the FER rs7716388 G allele was associated with the up-regulation of FER mRNA expression levels in lung tissue. Our results indicated that these two functional SNPs in the FRGs may be prognostic biomarkers for the prognosis of NSCLC patients, and the possible mechanism may be through modulating the expression of their corresponding genes.

Indexed as

ArylsulfotransferaseCarcinoma, Non-Small-Cell LungLung NeoplasmsPolymorphism, Single NucleotideSulfotransferasesAgedBiomarkers, TumorFemaleFibroblastsGenetic Predisposition to DiseaseHumansMaleMiddle AgedPrognosisArylsulfotransferaseBiomarkers, TumorSULF1 protein, humanSulfotransferasesfibroblastnon–small‐cell lung cancerprognosissingle‐nucleotide polymorphismtumor microenvironment

Identifiers

PMID39707607
PMCPMC11971011

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.