Evidence map›Paper›PMID 39711442›Full record

ArticleCancer medicine2024

5-Hydroxymethylcytosine Profiles of cfDNA in Urine as Diagnostic, Differential Diagnosis and Prognostic Markers for Multiple Myeloma.

Weiwei Xie, Xuehui Li, Hangyu Chen, Jinlin Chu, Lei Zhang, Bo Tang, Wenrong Huang, Linlin Li, Jian Lin, Yujun Dong

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Article in Cancer medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

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2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Weiwei XieDepartment of Hematology, Peking University First Hospital, Beijing, People's Republic of China.ORCID https://orcid.org/0000-0003-1569-5346
Xuehui LiDepartment of Pharmacology, Xinjiang Medical University, Urumqi, China.ORCID https://orcid.org/0009-0006-3364-3688
Hangyu ChenDepartment of Pharmacy, Peking University Third Hospital, Beijing, China.
Jinlin ChuDepartment of Pharmacology, Xinjiang Medical University, Urumqi, China.
Lei ZhangDepartment of Pharmacy, Peking University Third Hospital, Beijing, China.
Bo TangDepartment of Hematology, Peking University First Hospital, Beijing, People's Republic of China.
Wenrong HuangDepartment of Hematology, Fifth Medical Center, General Hospital of the People's Liberation Army, Beijing, People's Republic of China.
Linlin LiDepartment of Pharmacology, Xinjiang Medical University, Urumqi, China.
Jian LinDepartment of Pharmacy, Peking University Third Hospital, Beijing, China.
Yujun DongDepartment of Hematology, Peking University First Hospital, Beijing, People's Republic of China.ORCID https://orcid.org/0000-0002-7935-6194

Funding

National Key Research and Development Program of China 2022YFC2406305National Natural Science Foundation of China 82274034
6 · The paper itself

Abstract

backgroundAn effective urine-based method for the diagnosis, differential diagnosis and prognosis of multiple myeloma (MM) has not yet been developed. Urine cell-free DNA (cfDNA) carrying cancer-specific genetic and epigenetic aberrations may enable a noninvasive "liquid biopsy" for diagnosis and monitoring of cancer.

methodsWe first identified MM-specific hydroxymethylcytosine signatures by comparing 64 MM patients, 23 amyloidosis (AM) patients and 59 healthy cohort. Then, we applied a machine learning algorithm to develop diagnostic and differential diagnosis model. Finally, the prognosis of MM patients was predicted based on their survival time at the last follow-up.

resultsWe identified 11 5hmC markers using logistic regression algorithm could effectively diagnosis MM (AUC = 0.902), and achieved 85.00% specificity and 85.71% sensitivity. These 11 markers could also effectively differential diagnosis MM (AUC = 0.805) with 88.89% specificity and 73.08% sensitivity. In addition, the prognostic prediction model also effectively predicted the prognosis of patients with MM (p < 0.01), of which 4 differential markers (RAPGEF2, BRD1, TET2, TRAF3IP2) could independently predict the prognosis of MM.

conclusionsTogether, our findings showed the value of urine cfDNA hydroxymethylcytosine markers in the diagnosis, differential diagnosis and prognosis of MM. Meantime, our study provides a promising and completely non-invasive method for the diagnosis, differential diagnosis and prognosis prediction of MM.

Indexed as

5-MethylcytosineBiomarkers, TumorMultiple MyelomaAdultAgedCell-Free Nucleic AcidsDiagnosis, DifferentialDNA MethylationFemaleHumansLiquid BiopsyMaleMiddle AgedPrognosis5-hydroxymethylcytosine5-MethylcytosineBiomarkers, TumorCell-Free Nucleic Acids5‐hydroxymethylcytosine (5hmC)diagnosticdifferential diagnosismultiple myelomaprognosticurine

Identifiers

PMID39711442
PMCPMC11664239

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.