Evidence map›Paper›PMID 39725906›Full record

ArticleBMC public health2024

Surveillance of public health pathogens in Lagos wastewater canals: a cross-sectional study.

Emelda E Chukwu, Azuka Okwuraiwe, Chioma N Kunle-Ope, Uche T Igbasi, Nneka Onyejepu, Kazeem Osuolale, Joseph O Shaibu, Adewale Ojogbede, Dennis Abuh, Ebelechukwu Afocha and 4 more

Abstract read
In one paragraph

Article in BMC public health, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Emelda E ChukwuCenter for Infectious Diseases Research, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria. emeldachukwu123@gmail.com.
Azuka OkwuraiweCenter for Human Virology and Genomics, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.
Chioma N Kunle-OpeCenter for Tuberculosis Research, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.
Uche T IgbasiCenter for Infectious Diseases Research, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.
Nneka OnyejepuCenter for Tuberculosis Research, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.
Kazeem OsuolaleMonitoring and Evaluation Unit, Nigerian Institute of Medical Research, Yaba, , Lagos State, Nigeria.
Joseph O ShaibuCenter for Human Virology and Genomics, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.
Adewale OjogbedePublic Health and Epidemiology Department, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.
Dennis AbuhCenter for Infectious Diseases Research, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.
Ebelechukwu AfochaCenter for Infectious Diseases Research, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.
Oluwatoyin AwoderuCenter for Infectious Diseases Research, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.
Kelechi ObiozorCenter for Infectious Diseases Research, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.
Adetoun MustaphaCenter for Infectious Diseases Research, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.
Rosemary AuduCenter for Human Virology and Genomics, Nigerian Institute of Medical Research, Yaba, Lagos State, Nigeria.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWastewater-based epidemiology (WBE) is already being adopted for the surveillance of health conditions of communities and shows great potential for the monitoring of infectious pathogens of public health importance. There is however paucity of robust data to support extensive WBE in Nigeria. This study evaluated the prevalence of clinically relevant infectious pathogens and provided antimicrobial resistance profiles of bacteria pathogens in wastewater canals in Lagos State at a single point in time.

methodsThis is a cross-sectional survey of wastewater canals in 20 Local Government Areas (LGAs) in Lagos State for detection of bacteria pathogens of public health importance including non-tuberculous mycobacteria and SARS-Cov-2 virus using cultural analysis and conventional Polymerase Chain Reaction (PCR) techniques. Descriptive epidemiological survey of communities around the canals was done using questionnaires to assess exposure pathways. Statistical analysis was done using SPSS version 27 while P value of < 0.05 was considered as significant.

resultsThree thousand and fifty-four (3054) questionnaires were administered to 1215 (39.8%) females and 1658 (54.3%) males in communities situated around 40 canals in 20 LGAs. Although majority (81.8%) reported using water closet toilet system and pit latrine (12.5%), a few of them admitted to open defaecation [101 (3.3%)] while 299 (9.8%) engaged in open field waste disposal. SARS-CoV-2 was not detected from wastewater in this study. Two mycobacterial species that included Mycobacterium fortitium group (13, 32.5%) and Mycobacterium kansasii (11, 27.5%) were identified in 15 out of 20 LGAs sampled. A total of 123 bacteria pathogens were isolated across the 40 canals. Prominent enteropathogens isolated included Escheriachia coli (28.5%), Salmonella spp (16.3%), Vibro cholerae (10.6%) and Shigella spp (5.7%). Extended spectrum beta-lactamase genes were prominent (87.5%) in the wastewater samples with almost a half (42.5%) of the canals containing both SHV and CTX-M.

conclusionThis study highlights the presence of pathogens with potential to cause epidemic in wastewater canals in Lagos State and provides evidence to inform policy and strategies for wastewater monitoring and treatment. Further studies involving longitudinal monitoring of time-based variations is needed to identify trends in pathogen loads and AMR patterns over time.

Indexed as

WastewaterAdultCOVID-19Cross-Sectional StudiesFemaleHumansMaleMiddle AgedNigeriaNontuberculous MycobacteriaPublic HealthSARS-CoV-2Wastewater-Based Epidemiological MonitoringWastewaterAntimicrobial resistanceAntimicrobial resistance genesEscherichia coliLagosMycobacterium fortitiumMycobacterium kansasiiPathogen detectionPublic health surveillanceVibrio choleraWastewater-based epidemiology

Identifiers

PMID39725906
PMCPMC11670414

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.