Evidence map›Paper›PMID 39727307›Full record

ArticleeLife2024

A transcription network underlies the dual genomic coordination of mitochondrial biogenesis.

Fan Zhang, Annie Lee, Anna V Freitas, Jake T Herb, Zong-Heng Wang, Snigdha Gupta, Zhe Chen, Hong Xu

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Mitochondria-Nuclear Crosstalk: Orchestrating mtDNA Maintenance.Environmental and molecular mutagenesis · 2025
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Fan ZhangNational Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, United States.ORCID https://orcid.org/0000-0002-9364-6040
Annie LeeNational Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, United States.
Anna V FreitasNational Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, United States.
Jake T HerbNational Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, United States.
Zong-Heng WangNational Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, United States.
Snigdha GuptaNational Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, United States.
Zhe ChenNational Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, United States.
Hong XuNational Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, United States.ORCID https://orcid.org/0000-0002-1423-1809

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitochondrial biogenesis requires the expression of genes encoded by both the nuclear and mitochondrial genomes. However, aside from a handful transcription factors regulating specific subsets of mitochondrial genes, the overall architecture of the transcriptional control of mitochondrial biogenesis remains to be elucidated. The mechanisms coordinating these two genomes are largely unknown. We performed a targeted RNAi screen in developing eyes with reduced mitochondrial DNA content, anticipating a synergistic disruption of tissue development due to impaired mitochondrial biogenesis and mitochondrial DNA (mtDNA) deficiency. Among 638 transcription factors annotated in the

Indexed as

Drosophila melanogasterGene Regulatory NetworksOrganelle BiogenesisTranscription FactorsAnimalsDNA, MitochondrialDrosophilaDrosophila ProteinsGenome, MitochondrialMitochondriaRNA InterferenceTranscription, GeneticDNA, MitochondrialDrosophila ProteinsTranscription FactorsChIP-seqD. melanogastergeneticsgenomicsmitochondrial biogenesisRNA-seqSDHATFAMtranscription factors

Identifiers

PMID39727307
PMCPMC11677238

What Socratic holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.