Evidence mapPaperPMID 39728693Full record

ArticleInvestigative ophthalmology & visual science2024

Integrated Profiling of Extracellular Vesicle microRNA Impact on Trabecular Meshwork mRNA Expression: Insights From Microarray Analysis.

Efrat Cohen-Davidi, Valeria Feinstein, Boris Knyazer, Elie Beit-Yannai, Isana Veksler-Lublinsky

Abstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Efrat Cohen-DavidiDepartment of Software and Information Systems Engineering, Faculty of Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Valeria FeinsteinClinical Biochemistry and Pharmacology Department, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Boris KnyazerDepartment of Ophthalmology, Soroka University Medical Center and Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Elie Beit-YannaiClinical Biochemistry and Pharmacology Department, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Isana Veksler-LublinskyDepartment of Software and Information Systems Engineering, Faculty of Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Extracellular vesicles (EVs) secreted by non-pigmented ciliary epithelial (NPCE) cells under oxidative stress may contribute to primary open-angle glaucoma (POAG) pathogenesis by altering gene expression in human trabecular meshwork (HTM) cells. This study investigated the impact of microRNAs (miRNAs) carried by NPCE-derived EVs on HTM cell gene expression under oxidative stress conditions. Methods: NPCE cells were exposed to oxidative stress, and EVs were isolated from control and stressed cells. HTM cells were treated with these EVs, followed by microarray analysis to identify differentially expressed miRNAs in EVs and messenger RNAs (mRNAs) in HTM cells. Bioinformatics analysis was used to explore miRNA-mRNA interactions, enriched Gene Ontology (GO) terms, and miRNA-mRNA-GO networks. Results: The study identified 54 differentially expressed miRNAs in stressed NPCE EVs. In HTM cells treated with stressed NPCE EVs, 88 genes were upregulated and 58 downregulated. GO analysis of upregulated genes showed enrichment in processes such as extracellular matrix organization, cell proliferation, and adhesion. Downregulated genes were associated with oxidative phosphorylation and adenosine triphosphate (ATP) biosynthesis. Notably, 59 out of 88 upregulated genes are known targets of downregulated miRNAs. Network analysis identified interactions between downregulated miRNAs and upregulated genes involved in key biological processes relevant to POAG pathogenesis. Conclusions: This study provides new insights into the potential role of NPCE-derived EVs and their miRNA cargo in POAG, suggesting novel mechanisms for disease progression and potential therapeutic targets for further investigation.

Indexed as

Extracellular VesiclesGene Expression ProfilingGene Expression RegulationGlaucoma, Open-AngleMicroRNAsOxidative StressRNA, MessengerTrabecular MeshworkCells, CulturedComputational BiologyHumansMicroarray AnalysisReal-Time Polymerase Chain ReactionMicroRNAsRNA, Messenger

Identifiers

PMID39728693
PMCPMC11684117

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.