Evidence mapPaperPMID 39728917Full record

ArticleProteomes2024

Affinity-Enriched Plasma Proteomics for Biomarker Discovery in Abdominal Aortic Aneurysms.

Nicolai Bjødstrup Palstrøm, Kristian Boje Nielsen, Amanda Jessica Campbell, Mette Soerensen, Lars Melholt Rasmussen, Jes Sanddal Lindholt, Hans Christian Beck

Abstract read
In one paragraph

Article in Proteomes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Nicolai Bjødstrup PalstrømCenter for Clinical Proteomics, Odense University Hospital, 5000 Odense, Denmark.ORCID 0000-0003-1480-6550
Kristian Boje NielsenCenter for Clinical Proteomics, Odense University Hospital, 5000 Odense, Denmark.
Amanda Jessica CampbellCenter for Clinical Proteomics, Odense University Hospital, 5000 Odense, Denmark.ORCID 0009-0003-3582-3728
Mette SoerensenResearch Unit for Epidemiology, Biostatistics and Biodemography, Department of Public Health, University of Southern Denmark, 5230 Odense, Denmark.ORCID 0000-0001-5268-3366
Lars Melholt RasmussenDepartment of Clinical Biochemistry, Odense University Hospital, 5000 Odense, Denmark.
Jes Sanddal LindholtDepartment of Cardiothoracic and Vascular Surgery, Odense University Hospital, 5000 Odense, Denmark.ORCID 0000-0001-9536-4488
Hans Christian BeckCenter for Clinical Proteomics, Odense University Hospital, 5000 Odense, Denmark.ORCID 0000-0002-7763-3637

Funding

Danish Cardiovascular Academy PhD2021012-HF
6 · The paper itself

Abstract

Abdominal aortic aneurysm (AAA) is a life-threatening condition characterized by the weakening and dilation of the abdominal aorta. Few diagnostic biomarkers have been proposed for this condition. We performed mass spectrometry-based proteomics analysis of affinity-enriched plasma from 45 patients with AAA and 45 matched controls to identify changes to the plasma proteome and potential diagnostic biomarkers. Gene ontology analysis revealed a significant upregulation of the proteins involved in inflammation, coagulation, and extracellular matrix in AAA patients, while proteins related to angiogenesis were among those downregulated. Using recursive feature elimination, we identified a subset of 10 significantly regulated proteins that were highly predictive of AAA. A random forest classifier trained on these proteins achieved an area under the curve (AUC) of 0.93 [95% CI: 0.91-0.95] using cross-validation. Further validation in a larger cohort is necessary to confirm these results.

Indexed as

abdominal aortic aneurysmaffinity enrichmentmachine learningmass spectrometryplasma biomarkersproteomics

Identifiers

PMID39728917
PMCPMC11678615

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.