Evidence map›Paper›PMID 39735641›Full record

ArticleFrontiers in endocrinology2024

Unveiling the molecular landscape of PCOS: identifying hub genes and causal relationships through bioinformatics and Mendelian randomization.

Yifang He, Yanli Wang, Xiali Wang, Shuangping Deng, Dandan Wang, Qingqing Huang, Guorong Lyu

Abstract read
In one paragraph

Article in Frontiers in endocrinology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yifang He *Department of Ultrasound, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, China.
Yanli Wang *Department of Ultrasound, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, China.
Xiali WangDepartment of Ultrasound, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, China.
Shuangping DengDepartment of Ultrasound, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, China.
Dandan WangDepartment of Ultrasound, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, China.
Qingqing HuangDepartment of Ultrasound, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, China.
Guorong LyuDepartment of Ultrasound, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Polycystic ovary syndrome (PCOS) is a complex endocrine disorder with various contributing factors. Understanding the molecular mechanisms underlying PCOS is essential for developing effective treatments. This study aimed to identify hub genes and investigate potential molecular mechanisms associated with PCOS through a combination of bioinformatics analysis and Mendelian randomization (MR). Methods: This study employed bioinformatics analysis in conjunction with MR methods using publicly available databases to identify hub genes. We employed complementary MR methods, including inverse-variance weighted (IVW), to determine the causal relationship between the hub genes and PCOS. Sensitivity analyses were performed to ensure results reliability. Enrichment analysis and immune infiltration analysis were further conducted to assess the role and mechanisms of hub genes in the development of PCOS. Additionally, we validated hub gene expression in both an animal model and serum samples from PCOS patients using qRT-PCR. Results: IVW analysis revealed significant associations between 10 hub genes and the risk of PCOS: CD93 [ Conclusions: Our bioinformatics combined with MR analysis revealed that CD93, CYBB, DOCK8, IRF1, MBOAT1, MYO1F, NLRP1, NOD2, PIK3R1 increase the risk of PCOS, while PTER decreases the risk of PCOS. This discovery has implications for clinical decision-making in terms of disease diagnosis, prognosis, treatment strategies, and opens up novel avenues for drug development.

Indexed as

Computational BiologyMendelian Randomization AnalysisPolycystic Ovary SyndromeAnimalsFemaleGene Regulatory NetworksGenetic Predisposition to DiseaseHumansRatsbioinformatic analysiscausal relationshipMendelian randomizationpcosSNP

Identifiers

PMID39735641
PMCPMC11671271

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.