Evidence map›Paper›PMID 39738257›Full record

ArticleScientific reports2024

Augmented prediction of vertebral collapse after osteoporotic vertebral compression fractures through parameter-efficient fine-tuning of biomedical foundation models.

Sibeen Kim, Inkyeong Kim, Woon Tak Yuh, Sangmin Han, Choonghyo Kim, Young San Ko, Wonwoo Cho, Sung Bae Park

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sibeen Kim *School of Biomedical Engineering, Korea University, Seoul, Republic of Korea.
Inkyeong Kim *Department of Neurosurgery, Kangwon National University Hospital, Chuncheon-si, Gangwon-do, Republic of Korea.
Woon Tak Yuh *Department of Neurosurgery, Hallym University College of Medicine, Chuncheon-si, Gangwon-do, Republic of Korea.
Sangmin HanDepartment of Intelligence Convergence, Yonsei University, Seoul, Republic of Korea.
Choonghyo KimDepartment of Neurosurgery, Kangwon National University Hospital, Chuncheon-si, Gangwon-do, Republic of Korea.
Young San KoDepartment of Neurosurgery, Kyungpook National University Hospital, 130 Dongdeok-ro, Daegu, 41944, Republic of Korea.
Wonwoo Cho *Kim Jaechul Graduate School of Artificial Intelligence, Korea Advanced Institute of Science and Technology, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea. wcho@kaist.ac.kr.
Sung Bae Park *Department of Medical Device Development, Seoul National University College of Medicine, Seoul, Republic of Korea. ddolbae01@naver.com.

Funding

This work was supported by the New Faculty Startup Fund from Seoul National University Number 800-20220279
6 · The paper itself

Abstract

Vertebral collapse (VC) following osteoporotic vertebral compression fracture (OVCF) often requires aggressive treatment, necessitating an accurate prediction for early intervention. This study aimed to develop a predictive model leveraging deep neural networks to predict VC progression after OVCF using magnetic resonance imaging (MRI) and clinical data. Among 245 enrolled patients with acute OVCF, data from 200 patients were used for the development dataset, and data from 45 patients were used for the test dataset. To construct an accurate prediction model, we explored two backbone architectures: convolutional neural networks and vision transformers (ViTs), along with various pre-trained weights and fine-tuning methods. Through extensive experiments, we built our model by performing parameter-efficient fine-tuning of a ViT model pre-trained on a large-scale biomedical dataset. Attention rollouts indicated that the contours and internal features of the compressed vertebral body were critical in predicting VC with this model. To further improve the prediction performance of our model, we applied the augmented prediction strategy, which uses multiple MRI frames and achieves a significantly higher area under the curve (AUC). Our findings suggest that employing a biomedical foundation model fine-tuned using a parameter-efficient method, along with augmented prediction, can significantly enhance medical decisions.

Indexed as

Fractures, CompressionMagnetic Resonance ImagingOsteoporotic FracturesSpinal FracturesAgedAged, 80 and overFemaleHumansMaleMiddle AgedNeural Networks, ComputerBiomedical foundation modelCompression fractureParameter-efficient fine-tuningSpineVision transformer

Identifiers

PMID39738257
PMCPMC11685640

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.