Evidence map›Paper›PMID 39738449›Full record

ArticleScientific reports2024

Genome-wide identification of high-affinity nitrate transporter 2 (NRT2) gene family under phytohormones and abiotic stresses in alfalfa (Medicago sativa).

Yanyan Luo, Lili Nan

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yanyan LuoPratacultural College, Key Laboratory of Grassland Ecosystem (Ministry of Education), Key Laboratory of Forage Gerplasm Innovation and New Variety Breeding of Ministry of Agriculture and Rural Affairs (Co-sponsored by Ministry and Province), Gansu Agricultural University, Lanzhou, 730070, Gansu, China.
Lili NanPratacultural College, Key Laboratory of Grassland Ecosystem (Ministry of Education), Key Laboratory of Forage Gerplasm Innovation and New Variety Breeding of Ministry of Agriculture and Rural Affairs (Co-sponsored by Ministry and Province), Gansu Agricultural University, Lanzhou, 730070, Gansu, China. nanll@gsau.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The high-affinity nitrate transporter 2 (NRT2) protein plays an important role in nitrate uptake and transport in plants. In this study, the NRT2s gene family were systematically analyzed in alfalfa. We identified three MsNRT2 genes from the genomic database. They were named MsNRT2.1-2.3 based on their chromosomal location. The phylogenetic tree revealed that NRT2 proteins were categorized into two main subgroups, which were further confirmed by their gene structure and conserved motifs. Three MsNRT2 genes distributed on 2 chromosomes. Furthermore, we studied the expression patterns of MsNRT2 genes in six tissues based on RNA-sequencing data from the Short Read Archive (SRA) database of NCBI, and the results showed that MsNRT2 genes were widely expressed in six tissues. After leaves and roots were treated with drought, salt, abscisic acid (ABA) and salicylic acid (SA) for 0-48 h, and we used quantitative RT-PCR to analyze the expression levels of MsNRT2 genes and the results showed that most of the MsNRT2 genes responded to these stresses. However, there are specific genes that play a role under specific treatment conditions. This result provides a basis for further research on the target genes. In summary, MsNRT2s play an irreplaceable role in the growth, development and stress response of alfalfa, and this study provides valuable information and theoretical basis for future research on MsNRT2 function.

Indexed as

Gene Expression Regulation, PlantMedicago sativaPhylogenyPlant Growth RegulatorsPlant ProteinsStress, PhysiologicalAbscisic AcidAnion Transport ProteinsDroughtsGene Expression ProfilingGenome, PlantMultigene FamilyNitrate TransportersAbscisic AcidAnion Transport ProteinsNitrate TransportersPlant Growth RegulatorsPlant ProteinsGene familyHormonesMedicago sativaNitrogenNRT2

Identifiers

PMID39738449
PMCPMC11685795

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.