Evidence map›Paper›PMID 39738786›Full record

ArticleScientific reports2024

Micromorphological features of brown rotted wood revealed by broad argon ion beam milling.

Rikako Tsukida, Tomohiro Hatano, Yuka Kojima, Satoshi Nakaba, Yoshiki Horikawa, Ryo Funada, Barry Goodell, Makoto Yoshida

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Rikako TsukidaUnited Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Saiwai-cho, Fuchu, Tokyo, 183-8509, Japan.
Tomohiro HatanoUnited Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Saiwai-cho, Fuchu, Tokyo, 183-8509, Japan.
Yuka KojimaFaculty of Agriculture, Tokyo University of Agriculture and Technology, Saiwai-cho, Fuchu, Tokyo, 183-8509, Japan.
Satoshi NakabaUnited Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Saiwai-cho, Fuchu, Tokyo, 183-8509, Japan.
Yoshiki HorikawaUnited Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Saiwai-cho, Fuchu, Tokyo, 183-8509, Japan.
Ryo FunadaUnited Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Saiwai-cho, Fuchu, Tokyo, 183-8509, Japan.
Barry GoodellDepartment of Microbiology, University of Massachusetts, Amherst, MA, 01003, USA.
Makoto YoshidaUnited Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Saiwai-cho, Fuchu, Tokyo, 183-8509, Japan. ymakoto@cc.tuat.ac.jp.

Funding

Japan Science and Technology Agency JPMJPF2104Japan Society for the Promotion of Science 23K23668
6 · The paper itself

Abstract

Brown rot fungi, the major decomposers in the boreal coniferous forests, cause a unique wood decay pattern but many aspects of brown rot decay mechanisms remain unclear. In this study, decayed wood samples were prepared by cultivation of the brown rot fungi Gloeophyllum trabeum and Coniophora puteana on Japanese coniferous wood of Cryptomeria japonica, and the cutting planes were prepared using broad ion beam (BIB) milling, which enables observation of intact wood, in addition to traditional microtome sections. Samples were observed using field-emission SEM revealing that areas inside the end walls of ray parenchyma cells were the first to be degraded. Osmium reaction precipitates were observed in the degraded regions, as well as in plasmodesmata. In the cell wall where ray parenchyma cells contacted with the tracheids, specific degradation of cross-field pits and hyphal elongation into this area was observed in degradation by both fungi. Other pit types were also degraded as noted in previous studies. Delamination between the S

Indexed as

WoodArgonBasidiomycotaCell WallCryptomeriaMicroscopy, Electron, ScanningPlant DiseasesArgonBroad ion beam millingBrown rot fungiRay parenchyma cellsTracheidsWood degradation

Identifiers

PMID39738786
PMCPMC11686018

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.