Evidence map›Paper›PMID 39745363›Full record

ArticlemBio2025

Transposon-sequencing across multiple

Chidiebere Akusobi, Sanjeevani Choudhery, Bouchra S Benghomari, Ian D Wolf, Shreya Singhvi, Thomas R Ioerger, Eric J Rubin

Abstract read
In one paragraph

Article in mBio, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Ribosomal protection as a linezolid resistance mechanism inAntimicrobial agents and chemotherapy · 2026
    Article
  3. Journal of bacteriology · 2026
    Review
  4. Article
  5. The role of colony morphotype in shaping gene essentiality inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chidiebere AkusobiDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.ORCID 0000-0002-1611-0015
Sanjeevani ChoudheryDepartment of Computer Science and Engineering, Texas A&M University, College Station, Texas, USA.
Bouchra S BenghomariDepartment of Biology, Northeastern University, Boston, Massachusetts, USA.
Ian D WolfDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Shreya SinghviDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, California, USA.
Thomas R IoergerDepartment of Computer Science and Engineering, Texas A&M University, College Station, Texas, USA.
Eric J RubinDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.ORCID 0000-0001-5120-962X

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Medical Scientist Training ProgramT32GM144273 · NIGMS · HARVARD MEDICAL SCHOOL · PI David Shumway Jones, Jacqueline A. Lees · 2022 to 2026
$14.7M
Molecular mechanisms of inherent drug resistance in non-tuberculous mycobacteriaR01AI179642 · NIAID · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI Jeremy Michael Rock, Eric J. Rubin · 2023 to 2026
$3.1M
NIAID NIH HHS R01 AI179642NIGMS NIH HHS T32 GM007753NIGMS NIH HHS T32 GM144273
6 · The paper itself

Abstract

IMPORTANCE: This study investigates the genetic diversity of

Indexed as

DNA Transposable ElementsGenetic VariationGenome, BacterialMycobacterium abscessusGenes, EssentialGenomicsHumansMycobacterium Infections, NontuberculousSequence Analysis, DNADNA Transposable Elementsessential genesfunctional diversitygenetic diversityMycobacterium abscessustransposon-sequencing

Identifiers

PMID39745363
PMCPMC11796383

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.