Evidence map›Paper›PMID 39753222›Full record

ArticleJournal of medical Internet research2024

Applying AI to Structured Real-World Data for Pharmacovigilance Purposes: Scoping Review.

Stella Dimitsaki, Pantelis Natsiavas, Marie-Christine Jaulent

Abstract readScoping Review
In one paragraph

Article in Journal of medical Internet research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Stella DimitsakiLaboratoire d'Informatique Médicale et d'Ingénierie des Connaissances en e-Santé - LIMICS, Inserm, Université Sorbonne Paris-Nord, Sorbonne Université, Paris, France.ORCID 0000-0002-6356-9531
Pantelis NatsiavasCentre for Research and Development Hellas, Institute of Applied Biosciences, Thessaloniki, Greece.ORCID 0000-0002-4061-9815
Marie-Christine JaulentLaboratoire d'Informatique Médicale et d'Ingénierie des Connaissances en e-Santé - LIMICS, Inserm, Université Sorbonne Paris-Nord, Sorbonne Université, Paris, France.ORCID 0000-0003-4445-7494

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundArtificial intelligence (AI) applied to real-world data (RWD; eg, electronic health care records) has been identified as a potentially promising technical paradigm for the pharmacovigilance field. There are several instances of AI approaches applied to RWD; however, most studies focus on unstructured RWD (conducting natural language processing on various data sources, eg, clinical notes, social media, and blogs). Hence, it is essential to investigate how AI is currently applied to structured RWD in pharmacovigilance and how new approaches could enrich the existing methodology.

objectiveThis scoping review depicts the emerging use of AI on structured RWD for pharmacovigilance purposes to identify relevant trends and potential research gaps.

methodsThe scoping review methodology is based on the PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) methodology. We queried the MEDLINE database through the PubMed search engine. Relevant scientific manuscripts published from January 2010 to January 2024 were retrieved. The included studies were "mapped" against a set of evaluation criteria, including applied AI approaches, code availability, description of the data preprocessing pipeline, clinical validation of AI models, and implementation of trustworthy AI criteria following the guidelines of the FUTURE (Fairness, Universality, Traceability, Usability, Robustness, and Explainability)-AI initiative.

resultsThe scoping review ultimately yielded 36 studies. There has been a significant increase in relevant studies after 2019. Most of the articles focused on adverse drug reaction detection procedures (23/36, 64%) for specific adverse effects. Furthermore, a substantial number of studies (34/36, 94%) used nonsymbolic AI approaches, emphasizing classification tasks. Random forest was the most popular machine learning approach identified in this review (17/36, 47%). The most common RWD sources used were electronic health care records (28/36, 78%). Typically, these data were not available in a widely acknowledged data model to facilitate interoperability, and they came from proprietary databases, limiting their availability for reproducing results. On the basis of the evaluation criteria classification, 10% (4/36) of the studies published their code in public registries, 16% (6/36) tested their AI models in clinical environments, and 36% (13/36) provided information about the data preprocessing pipeline. In addition, in terms of trustworthy AI, 89% (32/36) of the studies followed at least half of the trustworthy AI initiative guidelines. Finally, selection and confounding biases were the most common biases in the included studies.

conclusionsAI, along with structured RWD, constitutes a promising line of work for drug safety and pharmacovigilance. However, in terms of AI, some approaches have not been examined extensively in this field (such as explainable AI and causal AI). Moreover, it would be helpful to have a data preprocessing protocol for RWD to support pharmacovigilance processes. Finally, because of personal data sensitivity, evaluation procedures have to be investigated further.

Indexed as

Artificial IntelligencePharmacovigilanceElectronic Health RecordsHumansNatural Language Processingartificial intelligencedrug safetymachine learningpharmacovigilancereal-world datascoping review

Identifiers

PMID39753222
PMCPMC11729787

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.