Evidence map›Paper›PMID 39770301›Full record

ArticlePathogens (Basel, Switzerland)2024

Functional Analysis of Promoters, mRNA Cleavage, and mRNA Secondary Structure on

Ryan G Peters, Jessica M Kelly, Sarah Bibeau, Ying Zhou, Scarlet S Shell

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Pathogens (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. In vitro cleavage requirements and specificities of mycobacterial RNase E.Biochemical and biophysical research communications · 2026
    Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ryan G PetersDepartment of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA 01609, USA.ORCID 0000-0002-0467-7460
Jessica M KellyDepartment of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA 01609, USA.ORCID 0009-0007-7493-135X
Sarah BibeauDepartment of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA 01609, USA.ORCID 0009-0009-0975-4443
Ying ZhouDepartment of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA 01609, USA.
Scarlet S ShellDepartment of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA 01609, USA.ORCID 0000-0003-1136-1728

Funding

Surviving evolution: Short-term adaptations for fitnessP01AI143575 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI SABINE EHRT · 2020 to 2026
$18.2M
The roles of sRNA in the physiology and pathogenesis of Mycobacterium abscessus and other mycobacteriaR21AI156415 · NIAID · WORCESTER POLYTECHNIC INSTITUTE · PI SHELL, SCARLET SARA · 2021 to 2022
$395k
National Science Foundation 1652756NIAID NIH HHS P01 AI143575NIAID NIH HHS P01 AI143575-01A1NIAID NIH HHS R21 AI156415NIAID NIH HHS R21 AI156415-01A1
6 · The paper itself

Abstract

The ESX-1 secretion system is critical for the virulence of

Indexed as

5' Untranslated RegionsBacterial ProteinsGene Expression Regulation, BacterialMycobacterium smegmatisPromoter Regions, GeneticRNA, MessengerNucleic Acid Conformation5' Untranslated RegionsBacterial ProteinsRNA, Messenger5′ UTRESX-1EsxAEsxBmRNA cleavagemRNA processingmRNA stabilitymycobacteriaMycobacterium smegmatispromotertranscriptional regulationtranscription start sitetype VII secretion system

Identifiers

PMID39770301
PMCPMC11728522

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.