Evidence map›Paper›PMID 39791430›Full record

ArticleJournal of the American Heart Association2025

Hypermethylation of

Nicole D Dueker, Hongyu Zhao, Hannah Gardener, Sonya S Kaur, Chuanhui Dong, Digna Cabral, Ralph L Sacco, Susan H Blanton, Tatjana Rundek, Liyong Wang

Abstract read
In one paragraph

Article in Journal of the American Heart Association, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Nicole D DuekerJohn P. Hussman Institute for Human Genomics, University of Miami Miami FL USA.ORCID 0000-0001-9375-5637
Hongyu ZhaoDepartment of Biostatistics Yale School of Public Health New Haven CT USA.ORCID 0000-0003-1195-9607
Hannah GardenerDepartment of Neurology, Miller School of Medicine University of Miami Miami FL USA.ORCID 0000-0003-1416-632X
Sonya S KaurDepartment of Neurology, Miller School of Medicine University of Miami Miami FL USA.ORCID 0000-0002-2962-3637
Chuanhui DongDepartment of Neurology, Miller School of Medicine University of Miami Miami FL USA.ORCID 0000-0001-7165-355X
Digna CabralDepartment of Neurology, Miller School of Medicine University of Miami Miami FL USA.ORCID 0000-0001-7916-2026
Ralph L SaccoDepartment of Neurology, Miller School of Medicine University of Miami Miami FL USA.ORCID 0000-0003-4629-684X
Susan H BlantonJohn P. Hussman Institute for Human Genomics, University of Miami Miami FL USA.ORCID 0000-0002-5433-3439
Tatjana RundekDepartment of Neurology, Miller School of Medicine University of Miami Miami FL USA.ORCID 0000-0002-7115-9815
Liyong WangJohn P. Hussman Institute for Human Genomics, University of Miami Miami FL USA.ORCID 0000-0001-8299-2602

Funding

FAMILY STUDY OF STROKE RISK AND CAROTID ATHEROSCLEROSISR01NS040807 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BLANTON, SUSAN HALLORAN, RUNDEK, TATJANA · 2002 to 2022
$12.2M
NOVEL FACTORS FOR UNEXPLAINED PHENOTYPES OF SUBCLINICAL CAROTID ATHEROSCLEROSISR01NS065114 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BLANTON, SUSAN HALLORAN, RUNDEK, TATJANA · 2010 to 2014
$1.7M
Genetic Determinants of Subclinical Carotid DiseaseR01NS047655 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI RUNDEK, TATJANA · 2004 to 2008
$1.5M
Genetics Determinants of Extreme Phenotypes of Subclinical AtherosclerosisK24NS062737 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI RUNDEK, TATJANA · 2009 to 2013
$975k
NINDS NIH HHS K24 NS062737NINDS NIH HHS R01 NS040807NINDS NIH HHS R01 NS047655NINDS NIH HHS R01 NS065114
6 · The paper itself

Abstract

backgroundCarotid intima-media thickness (IMT) is a measure of atherosclerosis and a predictor of vascular diseases. Traditional vascular risk factors and genetic variants do not completely explain the variation in carotid IMT. We sought to identify epigenetic factors that may contribute to the remaining carotid IMT variability. METHODS AND

resultsAn epigenome-wide association study was performed in 61 Dominican families with 769 individuals. A cytosine nucleotide that precedes a guanine nucleotide methylation in blood-derived DNA was measured using the Human MethylationEPIC BeadChip. Linear mixed model analyses were performed regressing bifurcation carotid IMT (bIMT) on beta values for cytosine nucleotide that precedes a guanine nucleotide sites, adjusting for covariates, followed by differentially methylated region (DMR) analysis. One-sample Mendelian randomization analysis was conducted to investigate causal associations between DMRs and bIMT. Twenty-five DMRs were associated with bIMT (Sidak

conclusionsOur study and previous expression quantitative trait locus studies provide converging evidence that reduced

Indexed as

AmidohydrolasesCarotid Intima-Media ThicknessDNA MethylationAdolescentAdultAgedAged, 80 and overCpG IslandsDominican RepublicFemaleHumansLife StyleMaleMiddle AgedPromoter Regions, GeneticQuantitative Trait LociAmidohydrolasesPM20D1 protein, humanatherosclerosisepigeneticsrace and ethnicity

Identifiers

PMID39791430
PMCPMC12054445

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.