Evidence map›Paper›PMID 39803985›Full record

ArticleDevelopment (Cambridge, England)2025

A cardiac transcriptional enhancer is repurposed during regeneration to activate an anti-proliferative program.

Anupama Rao, Andrew Russell, Jose Segura-Bermudez, Charles Franz, Rejenae Dockery, Anton Blatnik, Jacob Panten, Mateo Zevallos, Carson McNulty, Maciej Pietrzak and 1 more

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Anupama RaoDepartment of Biological Chemistry and Pharmacology, The Ohio State University Medical Center, Columbus, OH 43210, USA.
Andrew RussellDepartment of Biological Chemistry and Pharmacology, The Ohio State University Medical Center, Columbus, OH 43210, USA.
Jose Segura-BermudezDepartment of Biological Chemistry and Pharmacology, The Ohio State University Medical Center, Columbus, OH 43210, USA.
Charles FranzDepartment of Biological Chemistry and Pharmacology, The Ohio State University Medical Center, Columbus, OH 43210, USA.
Rejenae DockeryDepartment of Biological Chemistry and Pharmacology, The Ohio State University Medical Center, Columbus, OH 43210, USA.
Anton BlatnikDepartment of Biological Chemistry and Pharmacology, The Ohio State University Medical Center, Columbus, OH 43210, USA.
Jacob PantenDepartment of Molecular Genetics, The Ohio State University, Columbus, OH 43210, USA.
Mateo ZevallosDepartment of Biological Chemistry and Pharmacology, The Ohio State University Medical Center, Columbus, OH 43210, USA.
Carson McNultyDepartment of Biological Chemistry and Pharmacology, The Ohio State University Medical Center, Columbus, OH 43210, USA.
Maciej PietrzakDepartment of Biomedical Informatics, The Ohio State University, Columbus, OH 43210, USA.
Joseph Aaron GoldmanDepartment of Biological Chemistry and Pharmacology, The Ohio State University Medical Center, Columbus, OH 43210, USA.ORCID 0000-0002-0800-6189

Funding

Ohio State University Neuroscience Center Core-Core EP30NS104177 · NINDS · OHIO STATE UNIVERSITY · PI BROWN, ANTHONY · 2017 to 2020
$1.9M
American Heart Association 17SDG33660922NIGMS NIH HHS P30-NS104177NINDS NIH HHS P30 NS104177Ohio State University
6 · The paper itself

Abstract

Zebrafish have a high capacity to regenerate their hearts. Several studies have surveyed transcriptional enhancers to understand how gene expression is controlled during heart regeneration. We have identified REN (the runx1 enhancer) that, during regeneration, regulates the expression of the nearby runx1 gene. We show that runx1 mRNA is reduced with deletion of REN (ΔREN), and cardiomyocyte proliferation is enhanced in ΔREN mutants only during regeneration. Interestingly, in uninjured hearts, ΔREN mutants have reduced expression of adamts1, a nearby gene that encodes a Collagen protease. This results in excess Collagen within cardiac valves of uninjured hearts. The ΔREN Collagen phenotype is rescued by an allele with Δrunx1 mutations, suggesting that in uninjured hearts REN regulates adamts1 independently of runx1. Taken together, this suggests that REN is rewired from adamts1 in uninjured hearts to stimulate runx1 transcription during regeneration. Our data point to a previously unappreciated mechanism for gene regulation during zebrafish heart regeneration. We report that an enhancer is rewired from expression in a distal cardiac domain to activate a different gene in regenerating tissue.

Indexed as

Enhancer Elements, GeneticHeartRegenerationZebrafishZebrafish ProteinsADAMTS1 ProteinAnimalsCell ProliferationCore Binding Factor Alpha 2 SubunitGene Expression Regulation, DevelopmentalMyocardiumMyocytes, CardiacADAMTS1 ProteinCore Binding Factor Alpha 2 SubunitZebrafish ProteinsGene regulationHeart regenerationTranscription enhancerZebrafish

Identifiers

PMID39803985
PMCPMC11883283

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.