Evidence map›Paper›PMID 39810199›Full record

ArticleMolecular brain2025

Alternative 3' UTR polyadenylation is disrupted in the rNLS8 mouse model of ALS/FTLD.

Randall J Eck, Paul N Valdmanis, Nicole F Liachko, Brian C Kraemer

Abstract read
In one paragraph

Article in Molecular brain, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Randall J EckGraduate Program in Neuroscience, University of Washington, Seattle, WA, 98195, USA.
Paul N ValdmanisDepartment of Genome Sciences, University of Washington, Seattle, WA, 98195, USA.
Nicole F LiachkoDivision of Gerontology and Geriatric Medicine, Department of Medicine, University of Washington, Seattle, WA, 98104, USA.
Brian C KraemerGraduate Program in Neuroscience, University of Washington, Seattle, WA, 98195, USA. kraemerb@uw.edu.ORCID 0000-0002-2252-7634

Funding

University of Washington Alzheimer's Disease Research CenterP30AG066509 · NIA · UNIVERSITY OF WASHINGTON · PI Amanda D. Boyd · 2020 to 2026
$29.0M
TDP-43 in Alzheimer's diseaseR01AG066729 · NIA · SEATTLE INST FOR BIOMEDICAL/CLINICAL RES · PI LIACHKO, NICOLE FARON · 2021 to 2025
$2.6M
Novel approaches to identify tandem repeat expansions in neurodegenerative diseaseR01NS122766 · NINDS · UNIVERSITY OF WASHINGTON · PI Paul Nils Valdmanis · 2022 to 2026
$1.9M
SPOP drives neurodegenerative tauopathyRF1AG078374 · NIA · SEATTLE INST FOR BIOMEDICAL/CLINICAL RES · PI KRAEMER, BRIAN C. · 2023 to 2023
$1.8M
Mechanisms underlying circular RNA biogenesis in Alzheimer’s disease related genesR21AG082032 · NIA · UNIVERSITY OF WASHINGTON · PI VALDMANIS, PAUL NILS · 2023 to 2024
$417k
Disruptions to nuclear proteostasis machinery as drivers of neurodegeneration in dementia.F99AG088436 · NIA · UNIVERSITY OF WASHINGTON · PI ECK, RANDALL · 2024 to 2025
$100k
BLRD VA I01 BX005762BLRD VA IK6 BX006467NIA NIH HHS F99 AG088436NIA NIH HHS P30 AG066509NIA NIH HHS R01 AG066729NIA NIH HHS R21 AG082032NIA NIH HHS RF1 AG078374NIH HHS F99AG088436NIH HHS R01AG066729NIH HHS R21AG082032NIH HHS RF1AG078374NINDS NIH HHS R01 NS122766U.S. Department of Veterans Affairs IK6BX006467
6 · The paper itself

Abstract

Recent research has highlighted widespread dysregulation of alternative polyadenylation in amyotrophic lateral sclerosis (ALS) and frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP). Here, we identify significant disruptions to 3` UTR polyadenylation in the ALS/FTLD-TDP mouse model rNLS8 that correlate with changes in gene expression and protein levels through the re-analysis of published RNA sequencing and proteomic data. A subset of these changes are shared with TDP-43 knock-down mice suggesting depletion of endogenous mouse TDP-43 is a contributor to polyadenylation dysfunction in rNLS8 mice. Some conservation exists between alternative polyadenylation in rNLS8 mice and human disease models including in disease relevant genes and biological pathways. Together, these findings support both TDP-43 loss and toxic gain-of-function phenotypes as contributors to the neurodegeneration in rNLS8 mice, nominating its continued utility as a preclinical model for investigating mechanisms of neurodegeneration in ALS/FTLD-TDP.

Indexed as

3' Untranslated RegionsAmyotrophic Lateral SclerosisFrontotemporal Lobar DegenerationPolyadenylationAnimalsDisease Models, AnimalDNA-Binding ProteinsHumansMice3' Untranslated RegionsDNA-Binding ProteinsALSAlternative polyadenylationFTLDTDP-43

Identifiers

PMID39810199
PMCPMC11734424

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.