Evidence map›Paper›PMID 39810752›Full record

ArticleNeurology. Genetics2025

Neonatal Encephalopathy: Novel Phenotypes and Genotypes Identified by Genome Sequencing.

Anastasia Ambrose, Vanda McNiven, Diane Wilson, Aleksandra Tempes, Mary Underwood, Vann Chau, Andreas Schulze, Agnieszka Wyszynska, Karl Desch, Anna R Malik and 1 more

Abstract read
In one paragraph

Article in Neurology. Genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Anastasia AmbroseDepartment of Medical Genetics, Faculty of Medicine and Dentistry, University of Alberta, Edmonton, Canada.
Vanda McNivenDivision of Genetics, Department of Pediatrics, McMaster Children's Hospital, Hamilton, Ontario, Canada.
Diane WilsonDivision of Neonatology, Department of Pediatrics, University of Toronto, Ontario, Canada.ORCID https://orcid.org/0000-0001-8350-5706
Aleksandra TempesFaculty of Biology, University of Warsaw, Poland.ORCID https://orcid.org/0000-0001-7870-6212
Mary UnderwoodDepartment of Pediatrics, University of Michigan, Ann Arbor, MI.
Vann ChauDivision of Neurology, Department of Pediatrics, University of Toronto, Ontario, Canada.ORCID https://orcid.org/0000-0001-8260-8738
Andreas SchulzeDivision of Clinical and Metabolic Genetics, Department of Pediatrics, The Hospital for Sick Children, University of Toronto, Ontario, Canada.ORCID https://orcid.org/0000-0001-8491-1095
Agnieszka WyszynskaFaculty of Biology, University of Warsaw, Poland.
Karl DeschDepartment of Pediatrics, University of Michigan, Ann Arbor, MI.
Anna R MalikFaculty of Biology, University of Warsaw, Poland.ORCID https://orcid.org/0000-0001-7732-0756
Saadet Mercimek-AndrewsDepartment of Medical Genetics, Faculty of Medicine and Dentistry, University of Alberta, Edmonton, Canada.ORCID https://orcid.org/0000-0001-8396-6764

Funding

The Molecular Genetics of Venous Thromboembolic DiseaseR01HL141399 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DESCH, KARL C · 2018 to 2022
$1.9M
NHLBI NIH HHS R01 HL141399
6 · The paper itself

Abstract

Background and Objectives: Neonatal encephalopathy (NE) is characterized by an abnormal level of consciousness with or without seizures in the neonatal period. It affects 1-6/1,000 live term newborns. We applied genome sequencing (GS) in term newborns with NE to investigate the underlying genetic causes. Methods: We enrolled term newborns according to inclusion/exclusion criteria during their Neonatal Intensive Care admission. We performed GS trio and applied bioinformatic tools. We developed pipelines for manual filters. We applied in silico prediction tools, protein 3D modeling, and functional characterization to assess the pathogenicity of variants. Results: Seventeen newborns fulfilled inclusion criteria. We identified 12 variants in 10 genes. We classified 4 variants in Discussion: The diagnostic rate of research GS was 41% in our prospective study. We broaden the phenotypic spectrum of

Identifiers

PMID39810752
PMCPMC11731368

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.