Evidence map›Paper›PMID 39811191›Full record

ArticleBiochemistry and biophysics reports2025

Heparin-binding of the human chitinase-like protein YKL-40 is allosterically modified by chitin oligosaccharides.

Unnur Magnusdottir, Finnbogi R Thormodsson, Lilja Kjalarsdottir, Hordur Filippusson, Johannes Gislason, Kristinn Ragnar Oskarsson, Jens G Hjorleifsson, Jon M Einarsson

Abstract read
In one paragraph

Article in Biochemistry and biophysics reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Unnur MagnusdottirGenis hf, Reykjavik, Iceland.
Finnbogi R ThormodssonUniversity of Akureyri, School of Health, Business, and Natural Sciences, Akureyri, Iceland.
Lilja KjalarsdottirGenis hf, Reykjavik, Iceland.
Hordur FilippussonSchool of Engineering and Natural Sciences, Science Institute, Department of Biochemistry, University of Iceland, Reykjavik, Iceland.
Johannes GislasonGenis hf, Reykjavik, Iceland.
Kristinn Ragnar OskarssonSchool of Engineering and Natural Sciences, Science Institute, Department of Biochemistry, University of Iceland, Reykjavik, Iceland.
Jens G HjorleifssonSchool of Engineering and Natural Sciences, Science Institute, Department of Biochemistry, University of Iceland, Reykjavik, Iceland.
Jon M EinarssonGenis hf, Reykjavik, Iceland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The chitinase-like protein YKL-40 (CHI3L1) has been implicated in the pathophysiology of inflammation and cancer. Recent studies highlight the growing interest in targeting and blocking the activity of YKL-40 to treat cancer. Some of those targeting-strategies have been developed to directly block the heparin-affinity of YKL-40 with promising results. This study explores how short chain chitooligosaccharides (ChOS) affect the heparin-binding affinity of YKL-40. Our findings reveal that ChOS act as allosteric effectors, decreasing the heparin-binding affinity of YKL-40 in a size- and dose-dependent manner. Our results provide insights into the heparin affinity of YKL-40 and how ChOS can be used to target the heparin activity of YKL-40 in diseases. Since ChOS has many beneficial properties, such as being non-toxic and biodegradable, these results provide intriguing opportunities for applying them as allosteric effectors of the heparin-binding affinity of YKL-40.

Indexed as

AllosteryBinding affinityChitin oligosaccharidesConformational changeHeparinYKL-40

Identifiers

PMID39811191
PMCPMC11732221

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.