Evidence map›Paper›PMID 39820434›Full record

ArticleNature communications2025

Single-cell transcriptome atlas of lamprey exploring Natterin- induced white adipose tissue browning.

Yue Pang, Yating Qin, Zeyu Du, Qun Liu, Jin Zhang, Kai Han, Jiali Lu, Zengbao Yuan, Jun Li, Shanshan Pan and 24 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors.

Yue Pang *College of Life Science, Liaoning Normal University, Dalian, 116081, China. pangyue01@163.com.ORCID http://orcid.org/0000-0002-9869-2863
Yating Qin *BGI Research, Qingdao, 266555, China.
Zeyu Du *College of Life Science, Liaoning Normal University, Dalian, 116081, China.
Qun Liu *BGI Research, Qingdao, 266555, China.
Jin Zhang *College of Life Science, Liaoning Normal University, Dalian, 116081, China.
Kai Han *BGI Research, Qingdao, 266555, China.ORCID http://orcid.org/0000-0002-3061-1895
Jiali Lu *College of Life Science, Liaoning Normal University, Dalian, 116081, China.
Zengbao YuanBGI Research, Qingdao, 266555, China.
Jun LiCollege of Life Science, Liaoning Normal University, Dalian, 116081, China.
Shanshan PanBGI Research, Qingdao, 266555, China.
Xinrui DongCollege of Life Science, Liaoning Normal University, Dalian, 116081, China.
Mengyang XuBGI Research, Qingdao, 266555, China.ORCID http://orcid.org/0000-0002-4487-7088
Dantong WangBGI Research, Qingdao, 266555, China.ORCID http://orcid.org/0000-0002-3277-5033
Shuo LiState Key Laboratory of Mariculture Biobreeding and Sustainable Goods, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, Shandong, 266071, China.ORCID http://orcid.org/0000-0002-4880-6105
Zhen LiBGI Research, Qingdao, 266555, China.
Yadong ChenBGI Research, Qingdao, 266555, China.
Zhisheng ZhaoCollege of Life Science, Liaoning Normal University, Dalian, 116081, China.
Zhe ZhangMGI Tech, Shenzhen, 518083, China.
Shunqin ChuanCollege of Life Science, Liaoning Normal University, Dalian, 116081, China.
Yue SongBGI Research, Qingdao, 266555, China.
Mingjie SunCollege of Life Science, Liaoning Normal University, Dalian, 116081, China.
Xiaodong JiaJoint Laboratory for Translational Medicine Research, Liaocheng People's Hospital, Liaocheng, Shandong, 252000, China.
Zhangyong XiaDepartment of Neurology, The Second People's Hospital of Liaocheng, Liaocheng, Shandong, 252000, China.
Liping ZhanBGI Research, Qingdao, 266555, China.
Zhen YueBGI Research, Sanya, 572025, China.ORCID http://orcid.org/0000-0001-8760-7574
Wei CuiBGI Research, Qingdao, 266555, China.
Jun WangBGI Research, Qingdao, 266555, China.
Ying GuBGI Research, Shenzhen, 518083, China.ORCID http://orcid.org/0000-0001-7822-0570
Ming NiMGI Tech, Shenzhen, 518083, China.
Huanming YangBGI Research, Shenzhen, 518083, China.ORCID http://orcid.org/0000-0002-0858-3410
Xun XuBGI Research, Shenzhen, 518083, China.ORCID http://orcid.org/0000-0002-5338-5173
Xin LiuBGI Research, Shenzhen, 518083, China. liuxin@genomics.cn.ORCID http://orcid.org/0000-0003-3256-2940
Qingwei LiCollege of Life Science, Liaoning Normal University, Dalian, 116081, China. lmianyizu@163.com.
Guangyi FanBGI Research, Qingdao, 266555, China. fanguangyi@genomics.cn.ORCID http://orcid.org/0000-0001-7365-1590

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lampreys are early jawless vertebrates that are the key to understanding the evolution of vertebrates. However, the lack of cytomic studies on multiple lamprey organs has hindered progress in this field. Therefore, the present study constructed a comprehensive cell atlas comprising 604,460 cells/nuclei and 70 cell types from 14 lamprey tissue samples. Comparison of cellular evolution across species revealed that most lamprey cell types are homologous to those in jawed vertebrates. We discovered acinar- and islet-like cell populations despite the lack of parenchymal organs in lampreys, providing evidence of pancreatic function in vertebrates. Furthermore, we investigated the heterogeneity of lamprey immune cell populations. Natterin was highly expressed in granulocytes, and NATTERIN was localized to the lipid droplets. Moreover, we developed a transgenic mouse model expressing Natterin to elucidate the role of NATTERIN in lipid metabolism, whereas the browning of white adipose tissue was induced. These findings elucidate vertebrate cellular evolution and advance our understanding of adipose tissue plasticity and metabolic regulation in lampreys.

Indexed as

Adipose Tissue, BrownAdipose Tissue, WhiteFish ProteinsLampreysTranscriptomeAnimalsLipid DropletsLipid MetabolismMiceMice, TransgenicSingle-Cell AnalysisFish Proteins

Identifiers

PMID39820434
PMCPMC11739602

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.