Evidence map›Paper›PMID 39824799›Full record

ArticleNature communications2025

Comparative transcriptomics in serial organs uncovers early and pan-organ developmental changes associated with organ-specific morphological adaptation.

Marie Sémon, Marion Mouginot, Manon Peltier, Claudine Corneloup, Philippe Veber, Laurent Guéguen, Sophie Pantalacci

Abstract readComparative Study
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Prespecified dental mesenchymal cells for the making of a tooth.International journal of oral science · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Marie Sémon *Laboratoire de Biologie et Modelisation de la Cellule, Ecole Normale Superieure de Lyon, CNRS, UMR 5239, Inserm, U1293, Universite Claude Bernard Lyon 1, 46 allee d'Italie, F-69364, Lyon, France. marie.semon@ens-lyon.fr.ORCID http://orcid.org/0000-0003-3479-7524
Marion MouginotLaboratoire de Biologie et Modelisation de la Cellule, Ecole Normale Superieure de Lyon, CNRS, UMR 5239, Inserm, U1293, Universite Claude Bernard Lyon 1, 46 allee d'Italie, F-69364, Lyon, France.ORCID http://orcid.org/0000-0001-8196-7202
Manon PeltierLaboratoire de Biologie et Modelisation de la Cellule, Ecole Normale Superieure de Lyon, CNRS, UMR 5239, Inserm, U1293, Universite Claude Bernard Lyon 1, 46 allee d'Italie, F-69364, Lyon, France.
Claudine CorneloupLaboratoire de Biologie et Modelisation de la Cellule, Ecole Normale Superieure de Lyon, CNRS, UMR 5239, Inserm, U1293, Universite Claude Bernard Lyon 1, 46 allee d'Italie, F-69364, Lyon, France.
Philippe VeberLaboratoire de Biometrie et Biologie Evolutive, Universite Claude Bernard Lyon 1, UMR CNRS 5558, 69622, Villeurbanne, France.ORCID http://orcid.org/0000-0003-0328-0143
Laurent GuéguenLaboratoire de Biometrie et Biologie Evolutive, Universite Claude Bernard Lyon 1, UMR CNRS 5558, 69622, Villeurbanne, France.
Sophie Pantalacci *Laboratoire de Biologie et Modelisation de la Cellule, Ecole Normale Superieure de Lyon, CNRS, UMR 5239, Inserm, U1293, Universite Claude Bernard Lyon 1, 46 allee d'Italie, F-69364, Lyon, France. sophie.pantalacci@ens-lyon.fr.ORCID http://orcid.org/0000-0002-0771-8985

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-16-IDEX-0005Agence Nationale de la Recherche (French National Research Agency) ANR 2011 JSV6 00501 "Convergdent"
6 · The paper itself

Abstract

Mice have evolved a new dental plan with two additional cusps on the upper molar, while hamsters were retaining the ancestral plan. By comparing the dynamics of molar development with transcriptome time series, we found at least three early changes in mouse upper molar development. Together, they redirect spatio-temporal dynamics to ultimately form two additional cusps. The mouse lower molar has undergone much more limited phenotypic evolution. Nevertheless, its developmental trajectory evolved as much as that of the upper molar and co-evolved with it. Among the coevolving changes, some are clearly involved in the new upper molar phenotype. We found a similar level of coevolution in bat limbs. In conclusion, our study reveals how serial organ morphology has adapted through organ-specific developmental changes, as expected, but also through shared changes that have organ-specific effects on the final phenotype. This highlights the important role of developmental system drift in one organ to accommodate adaptation in another.

Indexed as

Adaptation, PhysiologicalMolarTranscriptomeAnimalsBiological EvolutionCricetinaeGene Expression ProfilingGene Expression Regulation, DevelopmentalMiceOrgan SpecificityPhenotype

Identifiers

PMID39824799
PMCPMC11742040

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.