Evidence map›Paper›PMID 39838277›Full record

ArticleBMC plant biology2025

Genome-wide identification and expression analysis of CBF/DREB1 gene family in Medicago sativa L. and functional verification of MsCBF9 affecting flowering time.

Jing Cui, Yajing Li, Hao Liu, Xu Jiang, Lili Zhang, Hongbo Dai, Xue Wang, Fei He, Mingna Li, Junmei Kang

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jing Cui *Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Yajing Li *Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Hao LiuInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Xu JiangInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Lili ZhangInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Hongbo DaiInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Xue WangInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Fei HeInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Mingna LiInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Junmei KangInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China. kangjunmei@caas.cn.

Funding

National Key Research and Development Program of China 2022YFF1003203National Natural Science Foundation of China 32071868
6 · The paper itself

Abstract

backgroundThe C-repeat binding factor (CBF)/dehydration-responsive element binding (DREB1) belongs to a subfamily of the AP2/ERF (APETALA2/ethylene-responsive factor) superfamily, which can regulate many physiological and biochemical processes in plants, such as plant growth and development, hormone signal transduction and response to abiotic stress. Although the CBF/DREB1 family has been identified in many plants, studies of the CBF/DREB1 family in alfalfa are insufficient.

resultsIn this study, 25 MsCBF genes were identified in the genome of alfalfa ("Zhongmu No. 4"). These genes were distributed on chromosomes 1, 5, 6 and unassembled scaffolds. Phylogenetics divided the CBF members of Medicago sativa, Arabidopsis thaliana, and Medicago truncatula into six groups, of which group VI had the most MsCBFs members, reaching 52% (13/25). Gene duplication analysis showed that 64% (16/25) of MsCBFs formed tandem duplications, and 32% (8/25) formed segment duplications. The expression pattern of MsCBF9 under different hormone treatments was verified by RT-qPCR, and it was found that MsCBF9 responded to GA3, IAA, SA, and MeJA. Overexpression of MsCBF9 in Arabidopsis significantly delayed the flowering time of Arabidopsis. In contrast, the flowering time of the cbfs mutant was earlier, and overexpression of MsCBF9 also increased the number and size of Arabidopsis rosette leaves.

conclusionIn this study, the CBF/DREB1 family of alfalfa was comprehensively identified and analyzed, and the function of MsCBF9 in regulating flowering time was studied. This study laid a foundation for further analysis of the function of the CBF family in alfalfa. CLINICAL TRIAL NUMBER: Not applicable.

Indexed as

FlowersMedicago sativaPlant ProteinsTranscription FactorsGene Expression Regulation, PlantGenes, PlantGenome, PlantMultigene FamilyPhylogenyPlant Growth RegulatorsPlant Growth RegulatorsPlant ProteinsTranscription FactorsAlfalfaFlowering regulationMsCBF;genome-wide

Identifiers

PMID39838277
PMCPMC11752619

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.