Evidence map›Paper›PMID 39851951›Full record

ArticleCurrent oncology (Toronto, Ont.)2025

Single-Cell RNA Sequencing Reveals LEF1-Driven Wnt Pathway Activation as a Shared Oncogenic Program in Hepatoblastoma and Medulloblastoma.

Christophe Desterke, Yuanji Fu, Jenny Bonifacio-Mundaca, Claudia Monge, Pascal Pineau, Jorge Mata-Garrido, Raquel Francés

Abstract read
In one paragraph

Article in Current oncology (Toronto, Ont.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Christophe DesterkeFaculté de Médecine du Kremlin Bicêtre, Université Paris-Saclay, INSERM UMRS-1310, 94805 Villejuif, France.
Yuanji FuInstitut Necker Enfants Malades, INSERM, CNRS, Université Paris Cité, 75015 Paris, France.ORCID 0000-0002-2226-8230
Jenny Bonifacio-MundacaNational Tumor Bank, Department of Pathology, National Institute of Neoplastic Diseases, Lima 15024, Peru.ORCID 0000-0002-0798-7544
Claudia MongeInstitut Pasteur, Université Paris Cité, Unité Organisation Nucléaire et Oncogenèse, INSERM U993, 75015 Paris, France.ORCID 0000-0002-1215-5857
Pascal PineauInstitut Pasteur, Université Paris Cité, Unité Organisation Nucléaire et Oncogenèse, INSERM U993, 75015 Paris, France.ORCID 0000-0002-9407-1592
Jorge Mata-GarridoInstitut Pasteur, Université Paris Cité, Unité Organisation Nucléaire et Oncogenèse, INSERM U993, 75015 Paris, France.ORCID 0009-0004-5726-8814
Raquel FrancésEnergy & Memory, Brain Plasticity Unit, CNRS, ESPCI Paris, PSL Research University, 75006 Paris, France.ORCID 0000-0003-1428-4852

Funding

Filière Santé Maladie Rare du Foie de l'Adulte et de l'Enfant S-AC23007MEAE AMBASS FRANCE AU PEROU FSPI S-AC23007
6 · The paper itself

Abstract

(1) Background: Hepatoblastoma and medulloblastoma are two types of pediatric tumors with embryonic origins. Both tumor types can exhibit genetic alterations that affect the β-catenin and Wnt pathways; (2) Materials and Methods: This study used bioinformatics and integrative analysis of multi-omics data at both the tumor and single-cell levels to investigate two distinct pediatric tumors: medulloblastoma and hepatoblastoma; (3) Results: The cross-transcriptome analysis revealed a commonly regulated expression signature between hepatoblastoma and medulloblastoma tumors. Among the commonly upregulated genes, the transcription factor LEF1 was significantly expressed in both tumor types. In medulloblastoma, LEF1 upregulation is associated with the WNT-subtype. The analysis of LEF1 genome binding occupancy in H1 embryonic stem cells identified 141 LEF1 proximal targets activated in WNT medulloblastoma, 13 of which are involved in Wnt pathway regulation:

Indexed as

Cerebellar NeoplasmsHepatoblastomaLiver NeoplasmsLymphoid Enhancer-Binding Factor 1MedulloblastomaWnt Signaling PathwayChildHumansSequence Analysis, RNASingle-Cell AnalysisLEF1 protein, humanLymphoid Enhancer-Binding Factor 1genome binding occupancyhepatoblastomaLEF1medulloblastomaomicspediatric cancerpluripotencyscRNA sequencingWNT

Identifiers

PMID39851951
PMCPMC11763369

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.