Evidence map›Paper›PMID 39860977›Full record

ArticlePathogens (Basel, Switzerland)2024

First Report of SNPs Detection in TMEM154 Gene in Sheep from Poland and Their Association with SRLV Infection Status.

Magdalena Materniak-Kornas, Katarzyna Piórkowska, Katarzyna Ropka-Molik, Adrianna Dominika Musiał, Joanna Kowalik, Anna Kycko, Jacek Kuźmak

Abstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Magdalena Materniak-KornasDepartment of Biochemistry, National Veterinary Research Institute, 24-100 Pulawy, Poland.ORCID 0000-0002-2795-597X
Katarzyna PiórkowskaDepartment of Animal Molecular Biology, National Research Institute of Animal Production, 32-083 Balice, Poland.ORCID 0000-0002-4368-9624
Katarzyna Ropka-MolikDepartment of Animal Molecular Biology, National Research Institute of Animal Production, 32-083 Balice, Poland.ORCID 0000-0002-8555-0495
Adrianna Dominika MusiałDepartment of Animal Molecular Biology, National Research Institute of Animal Production, 32-083 Balice, Poland.ORCID 0000-0002-4194-9402
Joanna KowalikDepartment of Biochemistry, National Veterinary Research Institute, 24-100 Pulawy, Poland.
Anna KyckoDepartment of Pathology, National Veterinary Research Institute, 24-100 Pulawy, Poland.ORCID 0000-0002-9925-2050
Jacek KuźmakDepartment of Biochemistry, National Veterinary Research Institute, 24-100 Pulawy, Poland.

Funding

National Veterunary Research Institute S/573
6 · The paper itself

Abstract

Small ruminant lentiviruses (SRLVs) infect sheep, causing a multiorganic disease called maedi-visna or ovine progressive pneumonia, which significantly affects the production and welfare of sheep, generating serious economic losses. Although not all infected animals develop fully symptomatic disease, they constantly spread the virus in the flock. Since the infection is incurable and no vaccine is available, another approach is necessary to control SRLV infections. In recent years, an alternative for culling infected animals has become the approach based on identifying genetic markers for selecting SRLV-resistant individuals. Recent reports revealed several candidates, including gene encoding transmembrane protein 154 (TMEM154). Several single nucleotide polymorphisms (SNPs) are found within this gene in sheep of different breeds, but only some can be considered as resistant markers. This study aimed to investigate the presence of single polymorphic sites in TMEM154 gene in sheep of selected Polish flocks and assess their association with the infection and proviral load in the context of susceptibility to SRLV infection. In total 107 sheep, representing three breeds, were screened for their SRLV infection status by serological and PCR testing. All these animals were also genotyped to characterize the presence of SNPs in TMEM154 gene and estimate their potential of being the SRLV-resistance marker. The frequency of identified alleles differed among breeds. Moreover, the positive association between TMEM154 genotype and SRLV status was found for E35K polymorphism and two polymorphic sites in 5'UTR in one of analyzed breed. However, when the relationship between SNPs and SRLV proviral load was analyzed, five had a strong association, considering the whole population of tested sheep. Presented data, for the first time, identified the presence of SNPs in TMEM154 gene in sheep housed in Polish flocks and suggested that selecting SRLV-resistant animals based on this analysis might be possible, but further validation in a larger group of sheep is required.

Indexed as

Genetic Predisposition to DiseaseLentivirus InfectionsMembrane ProteinsPolymorphism, Single NucleotideSheep DiseasesAnimalsGenotypePolandSheepMembrane Proteinsgenotypingsheepsingle nucleotide polymorphismsmall ruminant lentiviruses (SRLVs)TMEM154

Identifiers

PMID39860977
PMCPMC11768335

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.