Evidence map›Paper›PMID 39861553›Full record

ArticlePlants (Basel, Switzerland)2025

Genome- and Transcriptome-Wide Characterization and Expression Analyses of bHLH Transcription Factor Family Reveal Their Relevance to Salt Stress Response in Tomato.

Jianling Zhang, Xiaoying Liu, Zuozhen Yin, Tiantian Zhao, Dan Du, Jing Li, Mingku Zhu, Yueying Sun, Yu Pan

Abstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  5. Exploring the Roles of theInternational journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jianling ZhangLaboratory of Plant Germplasm Resources Innovation and Utilization, College of Agriculture and Biology, Liaocheng University, Liaocheng 252000, China.ORCID 0009-0006-9020-3064
Xiaoying LiuLaboratory of Plant Germplasm Resources Innovation and Utilization, College of Agriculture and Biology, Liaocheng University, Liaocheng 252000, China.
Zuozhen YinLaboratory of Plant Germplasm Resources Innovation and Utilization, College of Agriculture and Biology, Liaocheng University, Liaocheng 252000, China.
Tiantian ZhaoLaboratory of Plant Germplasm Resources Innovation and Utilization, College of Agriculture and Biology, Liaocheng University, Liaocheng 252000, China.
Dan DuCollege of Horticulture and Landscape Architecture, Southwest University, Chongqing 400715, China.
Jing LiChongqing Academy of Agricultural Sciences, Chongqing 850030, China.
Mingku ZhuSchool of Life Sciences, Jiangsu Normal University, 101 Shanghai 16 Road, Xuzhou 221008, China.ORCID 0000-0002-3609-6505
Yueying SunLaboratory of Plant Germplasm Resources Innovation and Utilization, College of Agriculture and Biology, Liaocheng University, Liaocheng 252000, China.
Yu PanCollege of Horticulture and Landscape Architecture, Southwest University, Chongqing 400715, China.

Funding

Chongqing Postdoctoral Science Foundation CSTB2022NSCQ-BHX0037Natural Science Foundation of Shandong Province ZR2020QB154Natural Science Foundation of Shandong Province ZR2021MC079
6 · The paper itself

Abstract

The bHLH (basic helix-loop-helix) transcription factors function as crucial regulators in numerous biological processes including abiotic stress responses and plant development. According to our RNA-seq analysis of tomato seedlings under salt stress, we found that, although the bHLH gene family in tomato has been studied, there are still so many tomato bHLH genes that have not been identified and named, which will hinder the later study of

Indexed as

bHLH transcription factorsgenome-wide analysisplant tolerancesalt stressstress-responsive gene expressiontomatotranscriptome characterization

Identifiers

PMID39861553
PMCPMC11768425

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.