Evidence map›Paper›PMID 39870632›Full record

ArticleNature communications2025

Phosphorylation-dependent WRN-RPA interaction promotes recovery of stalled forks at secondary DNA structure.

Alessandro Noto, Pasquale Valenzisi, Flavia Di Feo, Federica Fratini, Tomasz Kulikowicz, Joshua A Sommers, Benedetta Perdichizzi, Maurizio Semproni, Valentina Palermo, Marco Crescenzi and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Cross-species incompatibilities offer new insights into the functional consequences of satellite DNA evolution.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2026
    Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Emerging drivers of DNA repeat expansions.Biochemical Society transactions · 2025
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Alessandro NotoMechanisms, Biomarkers and Models Section - Genome Stability Group, Department of Environment and Health, Istituto Superiore di Sanità, Viale Regina Elena, 299 - 00161, Rome, Italy.ORCID http://orcid.org/0000-0001-8337-3467
Pasquale Valenzisi *Mechanisms, Biomarkers and Models Section - Genome Stability Group, Department of Environment and Health, Istituto Superiore di Sanità, Viale Regina Elena, 299 - 00161, Rome, Italy.
Flavia Di Feo *Mechanisms, Biomarkers and Models Section - Genome Stability Group, Department of Environment and Health, Istituto Superiore di Sanità, Viale Regina Elena, 299 - 00161, Rome, Italy.
Federica FratiniCore Facilities Technical-Scientific Service - Mass Spectrometry Unit, Istituto Superiore di Sanità, Viale Regina Elena, 299 - 00161, Rome, Italy.ORCID http://orcid.org/0000-0003-0807-930X
Tomasz KulikowiczHelicases and Genomic Integrity Section, Translational Gerontology Branch, National Institute on Aging, NIH, 251 Bayview Blvd, Baltimore, MD, 21224, USA.
Joshua A SommersHelicases and Genomic Integrity Section, Translational Gerontology Branch, National Institute on Aging, NIH, 251 Bayview Blvd, Baltimore, MD, 21224, USA.
Benedetta PerdichizziMechanisms, Biomarkers and Models Section - Genome Stability Group, Department of Environment and Health, Istituto Superiore di Sanità, Viale Regina Elena, 299 - 00161, Rome, Italy.
Maurizio SemproniMechanisms, Biomarkers and Models Section - Genome Stability Group, Department of Environment and Health, Istituto Superiore di Sanità, Viale Regina Elena, 299 - 00161, Rome, Italy.
Valentina PalermoMechanisms, Biomarkers and Models Section - Genome Stability Group, Department of Environment and Health, Istituto Superiore di Sanità, Viale Regina Elena, 299 - 00161, Rome, Italy.
Marco CrescenziCore Facilities Technical-Scientific Service - Mass Spectrometry Unit, Istituto Superiore di Sanità, Viale Regina Elena, 299 - 00161, Rome, Italy.ORCID http://orcid.org/0000-0003-0156-1494
Robert M BroshHelicases and Genomic Integrity Section, Translational Gerontology Branch, National Institute on Aging, NIH, 251 Bayview Blvd, Baltimore, MD, 21224, USA.ORCID http://orcid.org/0000-0003-2676-4327
Annapaola FranchittoMechanisms, Biomarkers and Models Section - Genome Stability Group, Department of Environment and Health, Istituto Superiore di Sanità, Viale Regina Elena, 299 - 00161, Rome, Italy. annapaola.franchitto@iss.it.
Pietro PichierriMechanisms, Biomarkers and Models Section - Genome Stability Group, Department of Environment and Health, Istituto Superiore di Sanità, Viale Regina Elena, 299 - 00161, Rome, Italy. pietro.pichierri@iss.it.ORCID http://orcid.org/0000-0002-2702-3523

Funding

Determining how a Werner helicase (WRN) tumor suppressor complex regulates the human papillomavirus 16 life cycleR01DE029471 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI MORGAN, IAIN · 2021 to 2025
$2.8M
Associazione Italiana per la Ricerca sul Cancro (Italian Association for Cancer Research) 19971Associazione Italiana per la Ricerca sul Cancro (Italian Association for Cancer Research) 21428NIDCR NIH HHS R01 DE029471Worldwide Cancer Research 24-0262
6 · The paper itself

Abstract

The WRN protein is vital for managing perturbed replication forks. Replication Protein A strongly enhances WRN helicase activity in specific in vitro assays. However, the in vivo significance of RPA binding to WRN has largely remained unexplored. We identify several conserved phosphorylation sites in the acidic domain of WRN targeted by Casein Kinase 2. These phosphorylation sites are crucial for WRN-RPA interaction. Using an unphosphorylable WRN mutant, which lacks the ability to bind RPA, we determine that the WRN-RPA complex plays a critical role in fork recovery after replication stress countering the persistence of G4 structures after fork stalling. However, the interaction between WRN and RPA is not necessary for the processing of replication forks when they collapse. The absence of WRN-RPA binding hampers fork recovery, causing single-strand DNA gaps, enlarged by MRE11, and triggering MUS81-dependent double-strand breaks, which require repair by RAD51 to prevent excessive DNA damage.

Indexed as

DNADNA ReplicationReplication Protein AWerner Syndrome HelicaseCasein Kinase IIDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA DamageDNA RepairDNA, Single-StrandedHumansMRE11 Homologue ProteinNucleic Acid ConformationPhosphorylationProtein BindingRad51 RecombinaseCasein Kinase IIDNADNA-Binding ProteinsDNA, Single-StrandedMRE11 Homologue ProteinMRE11 protein, humanRAD51 protein, humanRad51 RecombinaseReplication Protein ARPA1 protein, humanWerner Syndrome HelicaseWRN protein, human

Identifiers

PMID39870632
PMCPMC11772831

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.