Evidence map›Paper›PMID 39870876›Full record

ArticleEuropean journal of human genetics : EJHG2025

RNA-sequencing unveils FLT4 splice site variants in variable congenital heart disease.

Maxim Verlee, Erika D'haenens, Laurenz De Cock, Laura Muiño Mosquera, Katya De Groote, Kristof Vandekerckhove, Joseph Panzer, Ellen Roets, Björn Menten, Sofie Symoens and 4 more

Erratum issuedAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Maxim VerleeCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.ORCID 0000-0002-9078-1415
Erika D'haenensCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.
Laurenz De CockCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.
Laura Muiño MosqueraCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.ORCID 0000-0002-3094-7807
Katya De GrooteDepartment of Pediatric Cardiology, Ghent University Hospital, Ghent, Belgium.
Kristof VandekerckhoveDepartment of Pediatric Cardiology, Ghent University Hospital, Ghent, Belgium.ORCID 0000-0002-1481-0878
Joseph PanzerDepartment of Pediatric Cardiology, Ghent University Hospital, Ghent, Belgium.
Ellen RoetsDepartment of Gynaecology, Ghent University Hospital, Ghent, Belgium.
Björn MentenCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.
Sofie SymoensCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.
Paul CouckeCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.
Tim Van DammeCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.ORCID 0000-0002-6424-4421
Sarah VergultCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium.ORCID 0000-0002-0816-6262
Bert CallewaertCenter for Medical Genetics, Ghent University Hospital, Ghent, Belgium. bert.callewaert@ugent.be.ORCID 0000-0002-9743-4205

Funding

Fonds Wetenschappelijk Onderzoek (Research Foundation Flanders) G035620N
6 · The paper itself

Abstract

The etiology of congenital heart disease (CHD) is complex, comprising both genetic and environmental factors. Despite documented familial occurrences, the genetic etiology remains largely elusive. Trio exome sequencing identified a heterozygous FLT4 splice site variant in two families with respectively tetralogy of Fallot (TOF), and variable CHD comprising both the TOF spectrum and aortic coarctation. In the first family, Sanger sequencing on cDNA confirmed aberrant splicing for the c.985+1G > A variant. In the second family, transcriptome sequencing uncovered altered splicing for the c.1657+6T > C variant, despite normal targeted Sanger sequencing. In conclusion, our study establishes FLT4 splice site variants as a molecular cause of both left and right-sided isolated CHD, with incomplete penetrance. RNA-sequencing emerges as a valuable technique in unraveling the missing inheritability of CHD.

Indexed as

Heart Defects, CongenitalRNA Splice SitesTetralogy of FallotExome SequencingFemaleHumansMalePedigreeRNA Splice Sites

Identifiers

PMID39870876
PMCPMC12322125

What Socratic holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.