Evidence map›Paper›PMID 39871346›Full record

ArticleMalaria journal2025

Genetic diversity of Plasmodium falciparum reticulocyte binding protein homologue-5, which is a potential malaria vaccine candidate: baseline data from areas of varying malaria endemicity in Mainland Tanzania.

Angelina J Kisambale, Dativa Pereus, Salehe S Mandai, Beatus M Lyimo, Catherine Bakari, Gervas A Chacha, Ruth B Mbwambo, Ramadhan Moshi, Daniel A Petro, Daniel P Challe and 11 more

Abstract read
In one paragraph

Article in Malaria journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Genetic metrics decodeFrontiers in genetics · 2026
    Article
  4. Pf8: an open dataset ofWellcome open research · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Angelina J KisambaleNational Institute for Medical Research, Dar Es Salaam, Tanzania.
Dativa PereusNational Institute for Medical Research, Dar Es Salaam, Tanzania.
Salehe S MandaiNational Institute for Medical Research, Dar Es Salaam, Tanzania.
Beatus M LyimoNelson Mandela African Institution of Science and Technology, Arusha, Tanzania.
Catherine BakariNational Institute for Medical Research, Dar Es Salaam, Tanzania.
Gervas A ChachaNational Institute for Medical Research, Dar Es Salaam, Tanzania.
Ruth B MbwamboNational Institute for Medical Research, Dar Es Salaam, Tanzania.
Ramadhan MoshiNational Institute for Medical Research, Dar Es Salaam, Tanzania.
Daniel A PetroUniversity of Dar Es Salaam, Dar Es Salaam, Tanzania.
Daniel P ChalleNational Institute for Medical Research, Tanga Research Centre, Tanga, Tanzania.
Misago D SethNational Institute for Medical Research, Dar Es Salaam, Tanzania.
Rashid A MadebeNational Institute for Medical Research, Dar Es Salaam, Tanzania.
Rule BudodoNational Institute for Medical Research, Dar Es Salaam, Tanzania.
Sijenunu AaronNational Malaria Control Programme, Dodoma, Tanzania.
Daniel MbwamboNational Malaria Control Programme, Dodoma, Tanzania.
Abdallah LusasiNational Malaria Control Programme, Dodoma, Tanzania.
Stella KajangePresident's Office, Regional Administration and Local Government, Dodoma, Tanzania.
Samwel LazaroNational Malaria Control Programme, Dodoma, Tanzania.
Ntuli KapologweDirectorate of Preventive Services, Ministry of Health, Dodoma, Tanzania.
Celine I MandaraNational Institute for Medical Research, Dar Es Salaam, Tanzania.
Deus S IshengomaNational Institute for Medical Research, Dar Es Salaam, Tanzania. deusishe@yahoo.com.

Funding

Bill and Melinda Gates Foundation INV 002202 and 067322Gates Foundation INV-002202
6 · The paper itself

Abstract

backgroundThe limited efficacy of the two recently approved malaria vaccines, RTS,S/AS01 and R21/Matrix- M™, highlights the need for alternative vaccine candidate genes. Plasmodium falciparum Reticulocyte Binding Protein Homologue 5 (Pfrh5) is a promising malaria vaccine candidate, given its limited polymorphism, its essential role in parasite survival, a lack of immune selection pressure and higher efficacy against multiple parasites strains. This study evaluated the genetic diversity of Pfrh5 gene among parasites from regions with varying malaria transmission intensities in Mainland Tanzania, to generate baseline data for this potential malaria vaccine candidate.

methodsThis study utilized secondary data of 697 whole-genome sequences which were generated by the MalariaGEN Community Network. The samples which were sequenced to generated the data were collected between 2010 and 2015 from five districts within five regions of Mainland Tanzania, with varying endemicities (Morogoro-urban district in Morogoro region, Muheza in Tanga, Kigoma-Ujiji in Kigoma, Muleba in Kagera, and Nachingwea district in Lindi region). Wright's fixation index (F

resultsOf the sequences used in this study, 84.5% (n = 589/697) passed quality control and 313 (53.1%) were monoclonal (contained infections from a single strain of P. falciparum) and were used for haplotype diversity and haplotype network analysis. High within-host diversity (Fws < 0.95) was reported in Kigoma-Ujiji (60.7%), Morogoro-urban (53.1%), and Nachingwea (50.8%), while Muleba (53.9%) and Muheza (61.6%) had low within-host diversity (Fws ≥ 0.95). PCA did not show any population structure and the mean F

conclusionLow levels of polymorphism in the pfrh5 gene were observed based on low nucleotide and haplotype diversity, a lack of population structure and negative Tajima's D values. This study provides essential data on the diversity of the Pfrh5 gene indicating that it can be considered in the development of the next generation malaria vaccines. Robust and intensive studies of this and other candidate genes are crucial to support the prioritization of the Pfrh5 gene for potential inclusion in a broadly cross-protective malaria vaccine.

Indexed as

Carrier ProteinsGenetic VariationMalaria, FalciparumMalaria VaccinesPlasmodium falciparumProtozoan ProteinsHaplotypesHumansTanzaniaCarrier ProteinsMalaria VaccinesProtozoan ProteinsRH5 protein, Plasmodium falciparumGenetic diversity of Pfrh5 geneMainland TanzaniaMalariaMalaria vaccinePfrh5Plasmodium falciparum

Identifiers

PMID39871346
PMCPMC11773767

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.