Evidence map›Paper›PMID 39872529›Full record

ArticleFrontiers in immunology2024

Multiomics characterization of breast angiosarcoma from an Asian cohort reveals enrichment for angiogenesis signaling pathway and tumor-infiltrating macrophages.

Tun Kiat Ko, Zexi Guo, Bavani Kannan, Boon Yee Lim, Jing Yi Lee, Zhimei Li, Elizabeth Chun Yong Lee, Bin Tean Teh, Jason Yongsheng Chan

Abstract read
In one paragraph

Article in Frontiers in immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Tun Kiat KoCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.
Zexi GuoCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.
Bavani KannanCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.
Boon Yee LimCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.
Jing Yi LeeCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.
Zhimei LiCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.
Elizabeth Chun Yong LeeCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.
Bin Tean TehLaboratory of Cancer Epigenome, National Cancer Centre Singapore, Singapore, Singapore.
Jason Yongsheng ChanCancer Discovery Hub, National Cancer Centre Singapore, Singapore, Singapore.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Recent epidemiological data suggests a rising incidence of breast angiosarcoma (AS-B) in the Western population, with over two-thirds related to irradiation or chronic lymphedema. However, unlike head and neck angiosarcoma (AS-HN), AS-B disease characteristics in Asia remain unclear. Methods: We examined clinical patterns of angiosarcoma patients (n = 176) seen in an Asiantertiary cancer center from 1999 to 2021, and specifically investigated the molecular and immune features of AS-B in comparison to AS-HN. Data from whole genome sequencing (WGS), NanoString gene expression profiling and 10x Genomics Visium spatial transcriptomics were analyzed. Results: Majority of cases were AS-HN (n = 104; 59.1%), while AS-B (n = 16, all females) accounted for 9.1% of the cases. The median age at diagnosis was 43 years (range, 26 to 74). Based on WGS, 4 of the 7 AS-B had non-synonymous somatic variants in 47 genes (range, 2 to 28 per case). These genes were functionally annotated and were enriched in cancer-related pathways such as regulation of cell differentiation, VEGFR and receptor tyrosine kinases signaling pathways. By NanoString gene expression profiling, ASB, compared to AS-HN, were enriched for angiogenesis, notch signaling and metastasis-associated matrix remodeling pathways. Additionally, AS-B were enriched for macrophages and CD8+ T cells expression signatures. Similarly, Visium spatial transcriptomics showed that AS-B were enriched for macrophages and T-cells. Discussion: In conclusion, in our AS-B cases, we observed a convergence of both mutational and expression signatures on angiogenic-related pathways. Thus, anti-angiogenic therapy could be an option to treat AS-B.

Indexed as

Breast NeoplasmsHemangiosarcomaNeovascularization, PathologicTumor-Associated MacrophagesAdultAgedAngiogenesisAsian PeopleFemaleGene Expression ProfilingHumansMiddle AgedMultiomicsSignal TransductionTranscriptomeTumor Microenvironmentimmune-oncologyimmunotherapynext generation sequencingsarcomatumor-infiltrating macrophages

Identifiers

PMID39872529
PMCPMC11770038

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.