Evidence map›Paper›PMID 39878653›Full record

ArticleMolecular biology of the cell2025

Quantitative profiling pH heterogeneity of acidic endolysosomal compartments using fluorescence lifetime imaging microscopy.

Dinghuan Deng, Youchen Guan, Ayse Sena Mutlu, Baiping Wang, Shihong Max Gao, Hui Zheng, Meng C Wang

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Autophagy-lysosomal pathway in neurodegeneration.Molecular neurodegeneration advances · 2026
    Review
  6. Article
  7. New Mechanisms for Regulation of Intracellular Collagen Degradation in Fibrotic Lesions of Periodontal Tissues.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Review
  8. Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Dinghuan DengJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147.
Youchen GuanJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147.
Ayse Sena MutluHuffington Center on Aging, Baylor College of Medicine, Houston, TX 77030.ORCID 0000-0002-2849-7210
Baiping WangHuffington Center on Aging, Baylor College of Medicine, Houston, TX 77030.
Shihong Max GaoJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147.
Hui ZhengHuffington Center on Aging, Baylor College of Medicine, Houston, TX 77030.
Meng C WangJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147.

Funding

TMEM106b as a lysosomal adaptor to influence brain aging and tau pathogenesisP01AG066606 · NIA · BAYLOR COLLEGE OF MEDICINE · PI ZHENG, HUI · 2021 to 2025
$13.5M
Lysosomal NADPH metabolism regulates proteostasis, aging and tauopathyRF1AG074540 · NIA · BAYLOR COLLEGE OF MEDICINE · PI DANG, WEIWEI · 2021 to 2021
$1.6M
ROLE OF TFEB IN TAUOPATHYRF1NS093652 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI ZHENG, HUI · 2021 to 2021
$1.5M
Lysosomal NADPH metabolism regulates proteostasis, aging and tauopathyR01AG074540 · NIA · BAYLOR COLLEGE OF MEDICINE · PI DANG, WEIWEI · 2024 to 2025
$1.0M
NIA NIH HHS P01 AG066606NIA NIH HHS R01 AG074540NIA NIH HHS RF1 AG074540NINDS NIH HHS RF1 NS093652
6 · The paper itself

Abstract

The endolysosomal system plays a crucial role in maintaining cellular homeostasis and promoting organism fitness. The pH of its acidic compartments is a crucial parameter for proper function, and it is dynamically influenced by both intracellular and environmental factors. Here, we present a method based on fluorescence lifetime imaging microscopy (FLIM) for quantitatively analyzing the pH profiles of acidic endolysosomal compartments in diverse types of primary mammalian cells and in live organism

Indexed as

EndosomesLysosomesAnimalsCaenorhabditis elegansHeLa CellsHumansHydrogen-Ion ConcentrationMiceMicroscopy, Fluorescence

Identifiers

PMID39878653
PMCPMC11974955

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.