Evidence map›Paper›PMID 39879112›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2025

LINE-1 Retrotransposons as Cell-free DNA Biomarkers for Multicancer Early Detection.

Jeffrey J Szymanski, Pradeep S Chauhan, Aadel A Chaudhuri

Abstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jeffrey J SzymanskiDepartment of Radiation Oncology, Mayo Clinic, Rochester, Minnesota.ORCID 0000-0002-8005-701X
Pradeep S ChauhanDepartment of Radiation Oncology, Mayo Clinic, Rochester, Minnesota.ORCID 0000-0003-4304-011X
Aadel A ChaudhuriDepartment of Radiation Oncology, Mayo Clinic, Rochester, Minnesota.ORCID 0000-0003-3115-3061

Funding

Determinants of toxicity and response to immune checkpoint blockade through integrative profiling of T cell clonal dynamics and plasma cell- free DNAR01CA283317 · NCI · MAYO CLINIC ROCHESTER · PI Aadel Chaudhuri, Aaron M Newman · 2024 to 2026
$3.4M
Novel ctDNA biomarker for androgen therapy in metastatic prostate cancerR01CA286127 · NCI · WASHINGTON UNIVERSITY · PI Aadel Chaudhuri, Christopher A Maher · 2024 to 2026
$1.8M
NCI NIH HHS R01 CA283317NCI NIH HHS R01 CA286127
6 · The paper itself

Abstract

LINE-1 retrotransposons, comprising 17% of the genome, drive cancer instability through hypomethylation. The Detection of long Interspersed nuclear element Altered Methylation ON plasma DNA (DIAMOND) assay, targeting LINE-1 hypomethylation with bisulfite sequencing of cell-free DNA, achieved AUCs of 88% to 100% across six cancer types, surpassing mutation-based diagnostics and suggesting utility in early cancer detection and management. See related article by Michel et al., p. 1275.

Indexed as

Biomarkers, TumorCell-Free Nucleic AcidsEarly Detection of CancerLong Interspersed Nucleotide ElementsNeoplasmsDNA MethylationHumansBiomarkers, TumorCell-Free Nucleic Acids

Identifiers

PMID39879112
PMCPMC11961311

What Socratic holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.