Evidence map›Paper›PMID 39879239›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

Bacterial sensor evolved by decreasing complexity.

Elizabet Monteagudo-Cascales, José A Gavira, Jiawei Xing, Félix Velando, Miguel A Matilla, Igor B Zhulin, Tino Krell

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Specificities of chemosensory receptors in the human gut microbiota.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Review
  5. Review
  6. Bacterial sensor evolved by decreasing complexity.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Review
  8. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Elizabet Monteagudo-Cascales *Department of Biotechnology and Environmental Protection, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada 18008, Spain.ORCID 0000-0001-6977-3640
José A Gavira *Laboratory of Crystallographic Studies, Instituto Andaluz de Ciencias de la Tierra-Consejo Superior de Investigaciones Científicas, Armilla 18100, Spain.ORCID 0000-0002-7386-6484
Jiawei Xing *Department of Microbiology and Translational Data Analytics Institute, The Ohio State University, Columbus, OH 43210.ORCID 0000-0002-7691-1180
Félix VelandoDepartment of Biotechnology and Environmental Protection, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada 18008, Spain.
Miguel A MatillaDepartment of Biotechnology and Environmental Protection, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada 18008, Spain.ORCID 0000-0002-8468-9604
Igor B ZhulinDepartment of Microbiology and Translational Data Analytics Institute, The Ohio State University, Columbus, OH 43210.ORCID 0000-0002-6708-5323
Tino KrellDepartment of Biotechnology and Environmental Protection, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada 18008, Spain.ORCID 0000-0002-9040-3166

Funding

Computational Genomics of Signal TransductionR35GM131760 · NIGMS · OHIO STATE UNIVERSITY · PI Igor B. Jouline · 2019 to 2026
$3.2M
Consejería de Conocimiento, Investigación y Universidad, Junta de Andalucía (Ministry of Knowledge, Research and University, Andalusia) P18-FR-1621HHS | NIH (NIH) R35GM131760MEC | Consejo Superior de Investigaciones Científicas (CSIC) 2024AEP062Ministerio de Ciencia e Innovación (MCIN) PID2019-103972GA-I00Ministerio de Ciencia e Innovación (MCIN) PID2020-112612 GB-I00Ministerio de Ciencia e Innovación (MCIN) PID2020-116261 GB-I00Ministerio de Ciencia e Innovación (MCIN) PID2023-146216NB-I00Ministerio de Ciencia e Innovación (MCIN) PID2023-146281NB-I00NIGMS NIH HHS R35 GM131760
6 · The paper itself

Abstract

Bacterial receptors feed into multiple signal transduction pathways that regulate a variety of cellular processes including gene expression, second messenger levels, and motility. Receptors are typically activated by signal binding to ligand-binding domains (LBDs). Cache domains are omnipresent LBDs found in bacteria, archaea, and eukaryotes, including humans. They form the predominant family of extracytosolic bacterial LBDs and were identified in all major receptor types. Cache domains are composed of either a single (sCache) or a double (dCache) structural module. The functional relevance of bimodular LBDs remains poorly understood. Here, we identify the PacF chemoreceptor in the phytopathogen

Indexed as

Bacterial ProteinsPectobacteriumChemotaxisEvolution, MolecularFormatesLigandsProtein DomainsSignal TransductionBacterial ProteinsFormatesformic acidLigandschemotaxisevolutionreceptorsignal transduction

Identifiers

PMID39879239
PMCPMC11804620

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.