Evidence map›Paper›PMID 39880930›Full record

ReviewNature protocols2025

A multimodal imaging pipeline to decipher cell-specific metabolic functions and tissue microenvironment dynamics.

Sharavan Vishaan Venkateswaran, Peter Kreuzaler, Catherine Maclachlan, Greg McMahon, Gina Greenidge, Lucy Collinson, Josephine Bunch, Mariia Yuneva

Abstract readReview
In one paragraph

Review in Nature protocols, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sharavan Vishaan Venkateswaran *The Francis Crick Institute, London, UK. sharavan.venkateswaran@crick.ac.uk.ORCID 0000-0001-6910-9117
Peter Kreuzaler *The Francis Crick Institute, London, UK. pkreuzal@uni-koeln.de.ORCID 0000-0001-8684-9424
Catherine MaclachlanThe Francis Crick Institute, London, UK.
Greg McMahonThe National Physical Laboratory, Teddington, UK.
Gina GreenidgeThe National Physical Laboratory, Teddington, UK.
Lucy CollinsonThe Francis Crick Institute, London, UK.ORCID 0000-0003-0260-613X
Josephine BunchThe National Physical Laboratory, Teddington, UK.
Mariia YunevaThe Francis Crick Institute, London, UK. mariia.yuneva@crick.ac.uk.ORCID 0000-0003-3455-9374

Funding

Cancer Research UK CC2082Wellcome Trust FC001223
6 · The paper itself

Abstract

Tissue microenvironments are extremely complex and heterogeneous. It is challenging to study metabolic interaction between the different cell types in a tissue with the techniques that are currently available. Here we describe a multimodal imaging pipeline that allows cell type identification and nanoscale tracing of stable isotope-labeled compounds. This pipeline extends upon the principles of correlative light, electron and ion microscopy, by combining confocal microscopy reporter or probe-based fluorescence, electron microscopy, stable isotope labeling and nanoscale secondary ion mass spectrometry. We apply this method to murine models of hepatocellular and mammary gland carcinomas to study uptake of glucose derived carbon (

Indexed as

Multimodal ImagingTumor MicroenvironmentAnimalsCarcinoma, HepatocellularFemaleIsotope LabelingLiver NeoplasmsMiceMicroscopy, ConfocalSpectrometry, Mass, Secondary Ion

Identifiers

PMID39880930
PMCPMC7617660

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.