Evidence map›Paper›PMID 39890859›Full record

ArticleNPJ systems biology and applications2025

Nucleus pulposus cell network modelling in the intervertebral disc.

Sofia Tseranidou, Maria Segarra-Queralt, Francis Kiptengwer Chemorion, Christine Lyn Le Maitre, Janet Piñero, Jérôme Noailly

Abstract read
In one paragraph

Article in NPJ systems biology and applications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Computational and structural biotechnology journal · 2025
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sofia TseranidouDepartment of Engineering, Universitat Pompeu Fabra, Barcelona, Spain. sofia.tseranidou@upf.edu.ORCID http://orcid.org/0000-0003-1459-5650
Maria Segarra-QueraltDepartment of Engineering, Universitat Pompeu Fabra, Barcelona, Spain.ORCID http://orcid.org/0000-0001-9332-0764
Francis Kiptengwer ChemorionDepartment of Engineering, Universitat Pompeu Fabra, Barcelona, Spain.
Christine Lyn Le MaitreDivision of Clinical Medicine, School of Medicine and Population Health, University of Sheffield, Sheffield, United Kingdom.ORCID http://orcid.org/0000-0003-4489-7107
Janet PiñeroHospital del Mar Medical Research Institute, Barcelona, Spain.
Jérôme NoaillyDepartment of Engineering, Universitat Pompeu Fabra, Barcelona, Spain.

Funding

EC | EU Framework Programme for Research and Innovation H2020 | H2020 Excellent Science (H2020 Priority Excellent Science) #955735
6 · The paper itself

Abstract

Intervertebral disc degeneration (IDD) results from an imbalance between anabolic and catabolic processes in the extracellular matrix (ECM). Due to complex biochemical interactions, a comprehensive understanding is needed. This study presents a regulatory network model (RNM) for nucleus pulposus cells (NPC), representing normal intervertebral disc (IVD) conditions. The RNM includes 33 proteins, and 153 interactions based on literature, incorporating key NPC regulatory mechanisms. A semi-quantitative approach calculates the basal steady state, accurately reflecting normal NPC activity. Model validation through published studies replicated pro-catabolic and pro-anabolic shifts, emphasizing the roles of transforming growth factor beta (TGF-β) and interleukin-1 receptor antagonist (IL-1Ra) in ECM regulation. This IVD RNM is a valuable tool for predicting IDD progression, offering insights into ECM degradation mechanisms and guiding experimental research on IVD health and degeneration.

Indexed as

Intervertebral DiscModels, BiologicalNucleus PulposusExtracellular MatrixHumansIntervertebral Disc DegenerationTransforming Growth Factor betaTransforming Growth Factor beta

Identifiers

PMID39890859
PMCPMC11785752

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.