Evidence map›Paper›PMID 39892608›Full record

ArticleJournal of advanced research2025

Targeted regulation of sterol biosynthesis genes according to perturbations in ergosterol biosynthesis in fungi.

Pengju Yu, Mi Zhou, Deshui Yu, Zhongchi Zhang, Shuting Ye, Yifa Yu, Xianyun Sun, Shaojie Li, Chengcheng Hu

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In one paragraph

Article in Journal of advanced research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Pengju YuState Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101 China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100101 China.
Mi ZhouState Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101 China; National Institute for Radiological Protection, China CDC, Beijing 100101 China.
Deshui YuInstitute of Microbiology, Heilongjiang Academy of Sciences, Harbin 150010 China.
Zhongchi ZhangShanghai Fondin Bio_Tech Company Limited, Shanghai 201204 China.
Shuting YeState Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101 China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100101 China.
Yifa YuNanning Harworld Biological Technology Company Limited, Nanning 530000 China.
Xianyun SunState Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101 China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100101 China.
Shaojie LiState Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101 China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100101 China. Electronic address: lisj@im.ac.cn.
Chengcheng HuState Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101 China. Electronic address: hucc@im.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionThe synthesis and regulation of ergosterol are vital for fungal growth and stress adaptation. While ergosterol-mediated feedback regulation is a recognized mechanism controlling sterol biosynthesis in fungi, prior research suggests the presence of additional regulatory mechanisms. However, the specifics of the alternative regulatory mechanisms have not been systematically investigated.

objectivesWe proposed that a regulatory network is likely to discern disturbances in sterol biosynthesis and trigger responses accordingly. This study aimed to validate the hypothesis and investigate the regulatory mechanisms.

methodsQuantitative Real-time PCR and HPLC-MS/MS were used to explore and compare the regulation of sterol biosynthesis in different fungi. Key transcription factors involved in the alternative regulatory mechanism in Neurospora crassa were identified by phenotypic profiling of a transcription factor mutant library. ChIP-qPCR, fluorescence confocal imaging, RNA sequencing, and gene set enrichment analysis (GSEA) were used to reveal the mechanism of each transcription factor.

resultsUnlike the canonical ergosterol-mediated feedback regulation in fungi like C. neoformans, our study demonstrated that the inhibitions of ergosterol biosynthesis at specific steps triggered distinct transcriptional responses of erg genes in fungi, including N. crassa and Aspergillus fumigatus. In N. crassa, the responses were orchestrated by different transcription factors. Specifically, the inhibition of ERG24 and ERG2 activated transcription factors SAH-2 and AtrR, resulting in the upregulation of erg24, erg2, erg25, and erg3. Furthermore, the inhibition of ERG11/CYP51 activated transcription factor NcSR, leading to the upregulation of erg11 and erg6. Phenotypic profiles of mutants of various N. crassa erg genes and the aforementioned transcription factors implied that the targeted regulation of ergosterol biosynthesis could fortify fungal viability within complex habitats.

conclusionOur study reveals a novel regulatory mechanism in fungi: targeted upregulation of specific sterol biosynthesis genes in response to given perturbations in ergosterol biosynthesis, exhibiting a higher degree of precision and sophistication in sterol biosynthesis regulation.

Indexed as

ErgosterolFungiGene Expression Regulation, FungalNeurospora crassaSterolsFungal ProteinsTranscription FactorsErgosterolFungal ProteinsSterolsTranscription FactorsErgosterolSterol biosynthesisSterol C14 demethylase ERG11/CYP51Sterol C14 reductase ERG24Sterol C8 isomerase ERG2Transcription factor

Identifiers

PMID39892608
PMCPMC12627898

What Socratic holds

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.