Evidence map›Paper›PMID 39894805›Full record

ArticleBMC plant biology2025

Comparative gametogenesis and genomic signatures associated with pollen sterility in the seedless mutant of grapevine.

Siddhi Chavan, Satish Phalake, Sujata Tetali, Vitthal T Barvkar, Ravindra Patil

Abstract readComparative Study
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Siddhi ChavanGenetics and Plant Breeding Group, Agharkar Research Institute, G. G. Agarkar Road, Pune, 411004, India.
Satish PhalakeGenetics and Plant Breeding Group, Agharkar Research Institute, G. G. Agarkar Road, Pune, 411004, India.
Sujata TetaliGenetics and Plant Breeding Group, Agharkar Research Institute, G. G. Agarkar Road, Pune, 411004, India.ORCID https://orcid.org/0000-0001-7811-695X
Vitthal T BarvkarDepartment of Botany, Savitribai Phule Pune University, Ganesh Khind, Pune, 411007, India.ORCID https://orcid.org/0000-0003-4009-5924
Ravindra PatilGenetics and Plant Breeding Group, Agharkar Research Institute, G. G. Agarkar Road, Pune, 411004, India. rmpatil@aripune.org.ORCID http://orcid.org/0000-0002-1673-7352

Funding

Department of Biotechnology, Ministry of Science and Technology, India DBT/2022-23/ARI/2079Science and Engineering Research Board CRG/2018/001239
6 · The paper itself

Abstract

backgroundSeedless grapes are in high demand for fresh and dry fruit consumption. Seedlessness in grapes (Vitis vinifera L.) is triggered by two different mechanisms: stenospermocarpy and parthenocarpy. However, the key regulators of seed development and their targets in grapes are not well characterized. The present study used the seeded grape hybrid ARI 516 and its seedless mutant to understand the molecular mechanisms controlling the seedless phenotype in grapes.

resultsGametogenesis studies demonstrated that the seedless mutant exhibits pollen sterility due to abnormal pollen morphology, significantly low viability, and a complete lack of germination ability. The macrogametophyte in the seedless mutant was significantly smaller than in ARI 516. Transcriptomic comparisons were performed during three developmental stages, including pre-flowering stage E-L 15, anthesis stage E-L 23, and berry formation E-L 31, to study altered developmental processes in the seedless mutant and ARI 516. Genes downregulated in the seedless mutant were enriched in the male gametophyte development-related pathways, which may cause pollen sterility. The RNAseq results were validated by qRT-PCR. Genome sequence data was also used to identify induced mutations in the seedless mutant, which revealed three homozygous and 25 heterozygous InDels in the genes related to male gametophyte development. RNAseq and genome sequencing data collectively indicate parthenocarpic seedless phenotype due to aberrant developmental and physiological processes involved in pollen formation, maturation and germination in the seedless mutant of ARI 516.

conclusionThe study showed the downregulation of transcription factors and their target genes involved in cell division, gibberellin biosynthesis and signalling, cell wall development, organization, and pollen germination. This study represents a comprehensive attempt to identify putative candidate genes associated with parthenocarpic pollen sterility in grapes using genomic approaches.

Indexed as

Gametogenesis, PlantPlant InfertilityPollenVitisGene Expression Regulation, PlantGerminationMutationTranscriptomeInDelParthenocarpyPollen developmentRNAseqSeedlessnessVitis vinifera L.

Identifiers

PMID39894805
PMCPMC11789394

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.