Evidence map›Paper›PMID 39897666›Full record

ArticleBreeding science2024

Polyploid QTL-seq identified QTLs controlling potato flesh color and tuber starch phosphorus content in a plexity-dependent manner.

Hiromoto Yamakawa, Tatsumi Mizubayashi, Noriyuki Kitazawa, Utako Yamanouchi, Tsuyu Ando, Yoshiyuki Mukai, Etsuo Shimosaka, Takahiro Noda, Kenji Asano, Kotaro Akai and 1 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Breeding science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Hiromoto YamakawaInstitute of Crop Science, National Agriculture and Food Research Organization (NARO), 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8518, Japan.
Tatsumi MizubayashiInstitute of Crop Science, National Agriculture and Food Research Organization (NARO), 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8518, Japan.
Noriyuki KitazawaInstitute of Crop Science, National Agriculture and Food Research Organization (NARO), 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8518, Japan.
Utako YamanouchiInstitute of Crop Science, National Agriculture and Food Research Organization (NARO), 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8518, Japan.
Tsuyu AndoInstitute of Crop Science, National Agriculture and Food Research Organization (NARO), 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8518, Japan.
Yoshiyuki MukaiInstitute of Crop Science, National Agriculture and Food Research Organization (NARO), 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8518, Japan.
Etsuo ShimosakaHokkaido Agricultural Research Center, National Agriculture and Food Research Organization (NARO), 9-4 Shinseiminami, Memuro, Kasai, Hokkaido 082-0081, Japan.
Takahiro NodaHokkaido Agricultural Research Center, National Agriculture and Food Research Organization (NARO), 9-4 Shinseiminami, Memuro, Kasai, Hokkaido 082-0081, Japan.
Kenji AsanoHokkaido Agricultural Research Center, National Agriculture and Food Research Organization (NARO), 9-4 Shinseiminami, Memuro, Kasai, Hokkaido 082-0081, Japan.
Kotaro AkaiHokkaido Agricultural Research Center, National Agriculture and Food Research Organization (NARO), 9-4 Shinseiminami, Memuro, Kasai, Hokkaido 082-0081, Japan.
Kenji KatayamaHokkaido Agricultural Research Center, National Agriculture and Food Research Organization (NARO), 9-4 Shinseiminami, Memuro, Kasai, Hokkaido 082-0081, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The progenies of polyploid crops inherit multiple sets of homoeologous chromosomes through various combinations, which impedes the identification of the quantitative trait loci (QTL) governing agronomic traits and the implementation of DNA marker-assisted breeding. Previously, we developed a whole-genome sequencing-based polyploid QTL-seq method that utilizes comprehensively extracted simplex polymorphisms for QTL mapping. Here, we verified the detection of duplex QTLs by modifying the analytical settings to explore the QTLs governing tuber flesh color and starch phosphorus content using tetraploid potato (

Indexed as

DNA markerflesh colorplexitypolyploidpotatoQTL-seqstarch phosphorus content

Identifiers

PMID39897666
PMCPMC11780331

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.