Evidence map›Paper›PMID 39901041›Full record

ArticleJournal of human genetics2025

A novel missense pathogenic variants of TMEM53 in an Iranian family with craniotubular dysplasia, Ikegawa type.

Kaitao Ren, Niloofar Pirmarzdashti, Farzad Pakdel, Jinhui Zhu, Wanqi Liu, Lin Wang, Moosa Sadrhosseini, Farzaneh Abassi, Yao Xiong, Jiaqi Han and 5 more

Abstract read
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In one paragraph

Article in Journal of human genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Kaitao Ren *Department of Laboratory Animal Science, School of Basic Medical Sciences, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Niloofar Pirmarzdashti *Pediatric Cell and Gene Therapy Research Center, Children's Medical Center, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran. nil_dashty@yahoo.com.
Farzad Pakdel *Department of Oculo-Facial Plastic Surgery, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Jinhui ZhuDepartment of Laboratory Animal Science, School of Basic Medical Sciences, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Wanqi LiuDepartment of Laboratory Animal Science, School of Basic Medical Sciences, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Lin WangCenter of Medical Genetics, Northwest Women's and Children's Hospital, Xi'an, China.
Moosa SadrhosseiniOtorhinolaryngology Research Center, IKH Complex, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Farzaneh AbassiGrowth and development research center, Children's medical hospital, Tehran University of Medical Sciences, Tehran, Iran.
Yao XiongThe Assisted Reproduction Center, Northwest Women's and Children's Hospital, Xi'an, China.
Jiaqi HanDepartment of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Lianying JiaoDepartment of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Gen NishimuraDepartment of Radiology, Musashino-Yowakai Hospital, Tokyo, Japan.
Takahiro YamadaDivision of Clinical Genetics, Hokkaido University Hospital, Sapporo, Japan.
Rong QiangCenter of Medical Genetics, Northwest Women's and Children's Hospital, Xi'an, China.
Long GuoDepartment of Laboratory Animal Science, School of Basic Medical Sciences, Xi'an Jiaotong University Health Science Center, Xi'an, China. longguo601@gmail.com.ORCID http://orcid.org/0000-0002-9660-6941

Funding

National Natural Science Foundation of China (National Science Foundation of China) 82471900
6 · The paper itself

Abstract

Craniotubular dysplasia, Ikegawa type (CTDI) is a rare autosomal recessive skeletal dysplasia characterized by hyperostosis of the calvaria and skull base, metadiaphyseal undermodeling of the long tubular bones, and mild shortening and diaphyseal broadening of the short tubular bones. Its causal gene is TMEM53. Six CTDI families have been reported; however, its clinical course and prognosis still remain to be determined. Here, we report two Iranian siblings carrying a novel homozygous missense variant of TMEM53. The affected individuals were referred for progressive severe visual loss of unknown cause. The patient had severe optic atrophy and optic canal narrowing. Radiographic evaluation suggested the diagnosis of CTDI, which was confirmed by the identification of TMEM53 variant (c.704G > T, p.R235L) co-segregating in the consanguineous family. The proband underwent trans-nasal endoscopic optic canal decompression and showed remarkable improvement in visual acuity and daily visual tasks. We recommend early comprehensive clinical and genetic evaluation followed by proper treatment to improve the prognosis of CTDI.

Indexed as

Membrane ProteinsMutation, MissenseAdultChildConsanguinityFemaleHomozygoteHumansIranMalePedigreeWest Asian PeopleMembrane Proteins

Identifiers

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.