Evidence map›Paper›PMID 39905713›Full record

ArticleJournal of proteome research2025

Serum N-Glycomics with Nano-LC-QToF LC-MS/MS Reveals N-Glycan Biomarkers for Glioblastoma, Meningioma, and High-Grade Meningioma.

Atit Silsirivanit, Michael Russelle S Alvarez, Sheryl Joyce Grijaldo-Alvarez, Riya Gogte, Amnat Kitkhuandee, Nontaphon Piyawattanametha, Wunchana Seubwai, Sukanya Luang, Orasa Panawan, Panupong Mahalapbutr and 10 more

Abstract read
In one paragraph

Article in Journal of proteome research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Atit SilsirivanitDepartment of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.ORCID 0000-0002-5777-3843
Michael Russelle S AlvarezDepartment of Chemistry, University of California, Davis, Davis, California 95616, United States.ORCID 0000-0001-6411-9906
Sheryl Joyce Grijaldo-AlvarezDepartment of Chemistry, University of California, Davis, Davis, California 95616, United States.
Riya GogteDepartment of Chemistry, University of California, Davis, Davis, California 95616, United States.
Amnat KitkhuandeeDepartment of Surgery, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Nontaphon PiyawattanamethaDepartment of Surgery, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Wunchana SeubwaiDepartment of Forensic Medicine, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Sukanya LuangDepartment of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Orasa PanawanDepartment of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Panupong MahalapbutrDepartment of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.ORCID 0000-0003-4389-334X
Kulthida VaeteewoottacharnDepartment of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Kanlayanee SawanyawisuthDepartment of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Worachart Let-ItthipornDepartment of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Charupong SaengboonmeeDepartment of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Pichayen DuangthongphonDepartment of Surgery, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Kritsakorn JingjitDepartment of Surgery, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Anuchit PankongsapDepartment of Surgery, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Sakda WaraasawapatiDepartment of Pathology, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Chaiwat AphivatanasiriDepartment of Pathology, Faculty of Medicine, Khon Kaen University, Khon Kaen 40002, Thailand.
Carlito B LebrillaDepartment of Chemistry, University of California, Davis, Davis, California 95616, United States.ORCID 0000-0001-7190-5323

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alteration of glycosylation in cancer cells leads to the expression of tumor-associated glycans, which can be used as biomarkers for diagnosis and prognostic prediction of diseases. In this study, we used nano-LC-QToF to identify serum N-glycan biomarkers for the detection of brain tumors. We observed an increase in sialylated N-glycans and a decrease in fucosylated N-glycans in the serum of patients with glioblastoma (GBM) and meningioma (MG) compared to healthy individuals. In GBM, a combination of increased serum sialylated N-glycan (6_4_0_2 compound) and decreased fucosylated N-glycan (4_4_1_0 compound) was identified as the most appropriate panel, with an area under the curve (AUC) of 0.8660, 78.95% sensitivity, 84.21% specificity, and 82.89% accuracy. For MG, a combination of decreased 6_6_2_0 and 5_5_2_0 compounds and increased 4_4_1_1 compound achieved an AUC of 0.9260, 82.35% sensitivity, 78.57% specificity, and 80.26% accuracy for diagnosis of MG. Additionally, an increase in 5_5_1_0 and 4_3_0_0 compounds combined with a decrease in 7_7_4_3 was associated with high-grade MG (WHO grades II-III). In conclusion, we identified serum N-glycan profiles associated with brain tumors, highlighting their potential as biomarkers for the diagnosis and prognosis of these diseases.

Indexed as

Biomarkers, TumorBrain NeoplasmsGlioblastomaGlycomicsMeningeal NeoplasmsMeningiomaPolysaccharidesAdultAgedChromatography, LiquidFemaleGlycosylationHumansLiquid Chromatography-Mass SpectrometryMaleMiddle AgedBiomarkers, TumorPolysaccharidesbrain tumorcancerglycosylationN-glycantumor marker

Identifiers

PMID39905713
PMCPMC11894639

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.